Search results - 7 results

Targeted Whole Genome Sequencing of the Capripoxvirus Genome from Clinical Tissue Samples and Lyophilized Vaccine Batches.

of tiled amplicons. The resulting amplicons can be sequenced on all currently available high-throughput sequencing platforms. As an example, we have included a detailed protocol for performing nanopore ...

Genomic monitoring of SARS-CoV-2 variants using sentinel SARI hospital surveillance.

patients fulfilling the Belgian SARI definition between January 2020 and December 2022 were sequenced using the ARTIC Network amplicon tiling approach on a MinION platform. Weekly variant of concern (VOC) ...

A Summer of Cyanobacterial Blooms in Belgian Waterbodies: Microcystin Quantification and Molecular Characterizations

sequencing. The cyanobacterial diversity for two water samples was characterized with amplicon sequencing. Microcystins were detected above limit of quantification (LOQ) in 68 water samples, and the World ...

Strategy and Performance Evaluation of Low-Frequency Variant Calling for SARS-CoV-2 Using Targeted Deep Illumina Sequencing

of interest into raw wild-type sequencing data, or by mixing wild-type and mutant raw sequencing data, to construct mixed samples subjected to WGS using a tiling amplicon-based targeted metagenomics ...

Deep amplicon sequencing for culture-free prediction of susceptibility or resistance to 13 anti-tuberculous drugs.

J (2020) Abstract: Conventional molecular tests for detecting complex (MTBC) drug resistance on clinical samples cover a limited set of mutations. Whole genome sequencing (WGS) typically requires culture. ...

Arcobacter cibarius sp. nov., isolated from broiler carcasses.

2, p.713-7 (2005) Keywords: Animals Arcobacter Base Composition Chickens DNA, Bacterial DNA, Ribosomal Gram-Negative Bacterial Infections Molecular Sequence Data Nucleic Acid Hybridization Phenotype ...

MinION sequencing technology to characterize unauthorized GM petunia plants circulating on the European Union market

Roosens Source: Scientific reports, Volume 9, Issue 7141 (2019) Keywords: amplicon sequencing detection DNA walking GM petunia Oxford Nanopore Technologies Real-time PCR Abstract: In order to characterize ...

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