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A Bioinformatics Whole-Genome Sequencing Workflow for Clinical Mycobacterium tuberculosis Complex Isolate Analysis, Validated Using a Reference Collection Extensively Characterized with Conventional Methods and In Silico Approaches
still largely absent. We developed a bioinformatics workflow for (Illumina) WGS-based routine typing of MTB Complex (MTBC) member isolates allowing complete characterization including (sub)species ...
Report on a New Opioid NPS: Chemical and In Vitro Functional Characterization of a Structural Isomer of the MT-45 Derivative Diphenpipenol.
Abstract: In this paper, the identification and full characterization of a novel non-fentanyl opioid sourced online, which is a member of the 1-substituted-4-(1,2-diphenylethyl)piperazine derivatives related ...
METROFOOD-RI: Pilot services with physical, remote and virtual access
(IBA, Romania). remote access to the transmission electron microscope facility for physicochemical characterization of nanoparticles in food (Sciensano, Belgium). virtual access to two e-services for open data use, ...
Molecular and virological characterization of the first poultry outbreaks of Genotype VII.2 velogenic avian orthoavulavirus type 1 (NDV) in North‐West Europe, BeNeLux, 2018
Publication Type: Peer reviewed scientific article Authors: Mieke Steensels; Steven Van Borm; Ingeborg Mertens; Houdart, Philippe; Fabienne Rauw; Virginie Roupie; Chantal J. Snoeck; Manon Bourg; Serge Losch; Nancy Beerens; Thierry van den Berg; Bénédicte ...
A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products
constructs/events. However, when the GMM was not previously characterized and an isolate cannot be obtained, its presence cannot be proven. We present a metagenomics approach cap- able of delivering the proof of ...
Physicochemical characterization of nanoparticles in food additives in the context of risk identification
Publication Type: Peer reviewed scientific article Authors: Eveline Verleysen; Nadia Waegeneers; Sandra De Vos; Frederic Brassinne; Ledecq, Marina; Frederic Van Steen; Mirjana Andjelkovic; Raphael Janssens; Stella Mathioudaki; Lotte Delfosse; Ronny Machie ...
Validation strategy of a bioinformatics whole genome sequencing workflow for Shiga toxin-producing Escherichia coli using a reference collection extensively characterized with conventional methods
Kathleen Marchal; Nancy Roosens; Sigrid C.J. De Keersmaecker; Kevin Vanneste Source: Microbial Genomics, Volume 7, Issue 3 (2021) Abstract: Whole genome sequencing (WGS) enables complete characterization of ...
Dietary exposure assessment and risk characterization of citrinin and ochratoxin A in Belgium
S. De Saeger Source: Food and Chemical Toxicology, Volume 147 (2021) Keywords: Citrinin exposure assessment Mycotoxins Ochratoxin A Risk characterization Abstract: Exposure to mycotoxins is a worldwide ...
Chemical and toxciological characterization of e-liquid cigarettes
Publication Type: Dissertation Authors: Sophia Barhdadi; Eric Deconinck Source: Vrije Universiteit Brussel (VUB), Brussels, Belgium, p.214 (2020) Keywords: E-sigaret Abstract: The popularity of the electronic cigarette (e-cigarette) has increased signific ...
Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study.
demonstrating a data analysis approach for detailed characterization and phylogenetic placement of multiple bacterial strains of one species from shotgun metagenomic WGS data of an enriched food sample. Health ...