Search results - 127 results
Transforming Shiga toxin-producing surveillance through whole genome sequencing in food safety practices.
Nancy Roosens *; Sigrid C.J. De Keersmaecker * Source: Front Microbiol, Volume 14 (2023) Keywords: Food Safety implementation Shiga toxin-producing Escherichia coli Surveillance whole genome sequencing ...
Population Analysis of O26 Shiga Toxin-Producing Causing Hemolytic Uremic Syndrome in Italy, 1989-2020, Through Whole Genome Sequencing.
Sigrid C.J. De Keersmaecker; Bert Bogaerts; Kevin Vanneste; Stefano Morabito Source: Front Cell Infect Microbiol, Volume 12 (2022) Keywords: Escherichia coli Infections Escherichia coli Proteins ...
Burden of foodborne disease due to bacterial hazards associated with beef, dairy, poultry meat, and vegetables in Ethiopia and Burkina Faso, 2017
(Burkina Faso and Ethiopia) and attribution to specific foods. Country-specific estimates of the burden of disease in 2010 for Campylobacter spp., enterotoxigenic Escherichia coli (ETEC), Shiga-toxin ...
Decrease of Salmonella and Escherichia coli O157:H7 counts during dry-aging of beef but potential growth of Listeria monocytogenes under certain dry-aging conditions
Publication Type: Peer reviewed scientific article Authors: Inge Van Damme; S. Varalakshmi; L. De Zutter; E. Vossen; S. De Smet Source: Food Microbiology, Volume 104 (2022) Health Topics: Food consumption and food safety Consommation et sécurité alimenta ...
Whole-Genome Sequencing-Based Antimicrobial Resistance Characterization and Phylogenomic Investigation of 19 Multidrug-Resistant and Extended-Spectrum Beta-Lactamase-Positive Escherichia coli Strains Collected From Hospital Patients in Benin in 2019.
Publication Type: Peer reviewed scientific article Authors: Carine Laurence Yehouenou; Bert Bogaerts; Sigrid C.J. De Keersmaecker; Nancy Roosens; Marchal, Kathleen; Tchiakpe, Edmond; Affolabi, Dissou; Simon, Anne; Francis Moise Dossou; Kevin Vanneste; Oli ...
Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing Technologies
concept using Shiga toxin-producing Escherichia coli spiked food samples for a strain-level metagenomics foodborne outbreak investigation method using the MinION and Flongle flow cells from Oxford Nanopore ...
Colistin resistance genes mcr-1 to mcr-5, including a case of triple occurrence (mcr-1,-3 and-5), in Escherichia coli isolates from faeces of healthy pigs, cattle and poultry in Belgium, 2012–2016
Publication Type: Peer reviewed scientific article Authors: Michaël Timmermans; P Wattiau; Denis, Olivier; Cécile Boland Source: International Journal of Antimicrobial Agents, Volume 57, Issue 6 (2021) Health Topics: Antibiorésistance Antimicrobial resis ...
Validation strategy of a bioinformatics whole genome sequencing workflow for Shiga toxin-producing Escherichia coli using a reference collection extensively characterized with conventional methods
performs complete characterization of Shiga toxin-producing Escherichia coli (STEC) isolates including antimicrobial resistance prediction, virulence gene detection, serotype prediction, plasmid replicon ...
Fluoroquinolone resistance in Escherichia coli isolates after exposure to non-fluoroquinolone antibiotics: a retrospective case–control study
Journal of Antimicrobial Chemotherapy, Volume 75, Issue 7 (2020) Keywords: antibiotics Belgium Escherichia coli Fluoroquinolones Nitrofurantoin Trimethoprim-Sulfamethoxazole Combination urine specimens ...
The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.
Vanneste; Nancy Roosens; Sigrid C.J. De Keersmaecker Source: Foods, Volume 9, Issue 8 (2020) Keywords: Food Safety foodborne outbreak investigation Shiga toxin-producing Escherichia coli STEC Surveillance WGS ...