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The GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics

developed for a diversity of microorganisms, including bacteria and fungi. It was further tested on an empirical dataset of 18 (meta)genomes of early branching Cyanobacteria, providing the most up-to-date ...

Hazard characterization of Alternaria toxins to identify data gaps and improve risk assessment for human health.

Fungi of the genus Alternaria are ubiquitous plant pathogens and saprophytes which are able to grow under varying temperature and moisture conditions as well as on a large range of substrates. A spectrum ...

Implementation of MALDI-TOF Mass Spectrometry to Identify Fungi From the Indoor Environment as an Added Value to the Classical Morphology-Based Identification Tool

effects. The genera Aspergillus, Cladosporium, Penicillium, Alternaria, and yeasts, the most common fungi found indoors, include species with high allergenic and toxigenic potentials. Identification of these ...

Evaluation of a Liquid Media MALDI-TOF MS Protocol for the Identification of Dermatophytes Isolated from Infections.

Publication Type: Peer reviewed scientific article Authors: Pauline Lecerf; Roelke De Paepe; Yasaman Jazaeri; Normand, Anne-Cécile; Martiny, Delphine; Ann Packeu Source: J Fungi (Basel), Volume 8, ...

MALDI-TOF Mass Spectrometry Online Identification of Using the MSI-2 Application.

Dellière; Christine Bonnal; Sébastien Imbert; Sophie Brun; Ann Packeu; Stéphane Bretagne; Piarroux, Renaud Source: J Fungi (Basel), Volume 8, Issue 10 (2022) Abstract: is an emerging pathogen which recently ...

Investigations upon the Improvement of Dermatophyte Identification Using an Online Mass Spectrometry Application.

Blaizot; Cécile Nabet; Ann Packeu; Piarroux, Renaud Source: J Fungi (Basel), Volume 8, Issue 1 (2022) Abstract: Online MALDI- TOF mass spectrometry applications, such as MSI-2, have been shown to help ...

Clinical Origin and Species Distribution of spp. Isolates Identified by Molecular Sequencing and Mass Spectrometry: A European Multicenter Hospital Prospective Study.

Juliette Guitard; Ann Packeu; Piarroux, Renaud; Arnaud Fekkar Source: J Fungi (Basel), Volume 7, Issue 4 (2021) Abstract: spp. are widespread environmental fungi as well as pathogens that can affect plants, ...

The taxonomy of the Trichophyton rubrum complex: a phylogenomic approach

Volume 7, Issue 11 (2021) Keywords: Dermatophytes Fungi Genomics Phylogeny Taxonomy Health Topics:  Health and disease monitoring Surveillance de la santé et des maladies Ziekten en gezondheid in kaart ...

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