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Report on initial findings of on-site diagnostic tests and IT solutions for human clinical, veterinary and environmental samples for early warning of emerging resistant pathogens

et environnement Gezondheid en milieu Service:  Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Manuscript ...

From b to y ions, a decade of experience with peptide and protein analysis

Publication Type: Scientific poster, presentation or proceeding Authors: Celine Vanhee Source: Joint meeting FM WG CLEN meeting 30 Nov 22 (2022) Abstract: Recent advances in genomics, proteomics, ...

Metagenomic Characterization of Multiple Genetically Modified Bacillus Contaminations in Commercial Microbial Fermentation Products

12, Issue 12 (2022) Keywords: Bacillus food enzyme genetically modified microorganisms (GMM) hybrid genome assembly metagenomic shotgun sequencing Abstract: Genetically modified microorganisms (GMM) are ...

ESCAIDE 2022 Oral presentation: International outbreak of Salmonella Typhimurium linked to a chocolate factory in 2022: Belgian findings

were analysed for Salmonella spp. using real-time PCR. Whole genome sequence (WGS) analysis of isolates of probable cases and positive food samples is still ongoing. Results We identified 62 probable ...

Novel prediction models for genotoxicity based on biomarker genes in human HepaRGTM cells

(NAM s) to identify molecular events underlying the genotoxic mode of action of chemicals. Previously, we developed the GENOMARK biomarker, consisting of 84 genes selected based on whole genomics DNA ...

Introduction of WGS in food microbiology: advantages and challenges

Keywords: antimicrobial resistance (AMR) Food Safety foodborne outbreak investigation Monitoring SciCom Whole genome sequencing (WGS) Abstract: In October 2021 the Scientific Committee of the Federal Agency ...

First Belgian Report of Ertapenem Resistance in an ST11 Klebsiella Pneumoniae Strain Isolated from a Dog Carrying blaSCO-1 and blaDHA-1 Combined with Permeability Defects

(MLST) and the identification and localization of antimicrobial resistance (AMR) and virulence-associated genes. Three plasmids were reconstructed from the whole-genome sequence (WGS) data: the conjugative ...

Genomic epidemiology of persistently circulating MDR Shigella sonnei strains associated with men who have sex with men (MSM) in Belgium (2013–19)

Publication Type: Peer reviewed scientific article Authors: Nathalie Fischer; Margo Maex; Wesley Mattheus; An Van den Bossche; Dieter Van Cauteren; Valeska Laisnez; Hammami, Naïma; Pieter-Jan Ceyssens Source: Journal of Antimicrobial Chemotherapy, Volume ...

Identification of diffusion routes of O/EA-3 topotype of foot-and-mouth disease virus in Africa and Western Asia between 1974 and 2019- a phylogeographic analysis.

evolutionary phylodynamics of the causative serotype O viral strains all belonging to the East-Africa 3 topotype (O/ EA-3). We analyzed a total of 489 sequences encoding the FMDV VP1 genome region generated from ...

Shotgun metagenomics for strain-level food-borne outbreak investigation

activiteiten in toegepaste genomica Transversal activities in applied genomics Full text language:  English Category:  Scientific posters, presentations and proceedings FOS Classification:  1.6 Biological ...

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