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Application of a strain-level shotgun metagenomics approach on food samples: resolution of the source of a Salmonella food-borne outbreak

Pochet, Brigitte; Cantaert, Vera; Marchal, Kathleen; Denayer, Sarah; De Keersmaecker, Sigrid Source: Microbial Genomics, Volume 7, Issue 4 (2021) Keywords: food surveillance Metagenomics outbreak Salmonella ...

Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing Technologies

Publication Type: Peer reviewed scientific article Authors: Buytaers, Florence; Assia Saltykova; Denayer, Sarah; Verhaegen, Bavo; Vanneste, Kevin; Roosens, Nancy; Piérard, Denis; Marchal, Kathleen ...

Whole Genome Sequencing Provides an Added Value to the Investigation of Staphylococcal Food Poisoning Outbreaks

Publication Type: Peer reviewed scientific article Authors: Nouws, Stéphanie; Bogaerts, Bert; Verhaegen, Bavo; Denayer, Sarah; Laeremans, Lasse; Marchal, Kathleen; Roosens, Nancy; Vanneste, Kevin; ...

A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products

Kevin; Marchal, Kathleen; Roosens, Nancy; De Keersmaecker, Sigrid Source: Food Chemistry: Molecular Sciences, Volume 2 (2021) Keywords: AMR genetically modified microorganism identification long and short ...

A genoserotyping system for a fast and objective identification of Salmonella serotypes commonly isolated from poultry and pork food sectors in Belgium.

Publication Type: Peer reviewed scientific article Authors: Gand, Mathieu; Mattheus, Wesley; Roosens, Nancy; Dierick, Katelijne; Marchal, Kathleen; Bertrand, Sophie; De Keersmaecker, Sigrid Source: ...

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