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Use of Whole Genome Sequencing Data for a First in Silico Specificity Evaluation of the RT-qPCR Assays Used for SARS-CoV-2 Detection.

Source: Int J Mol Sci, Volume 21, Issue 15 (2020) Keywords: Betacoronavirus Coronavirus Infections Databases, Genetic Genome, Viral Humans Open Reading Frames Pandemics Pneumonia, Viral Polymorphism, Single ...

Complete coding sequence of a novel picorna-like virus in a blackbird infected with Usutu virus.

Volume 163, Issue 6 (2018) Keywords: Animals Belgium Bird Diseases Chromosome Mapping Coinfection Flavivirus Flavivirus Infections Genome, Viral Open Reading Frames Passeriformes Phylogeny Picornaviridae ...

Experimental evidence for proteins constituting virion components and particle morphogenesis of bacteriophage ZF40.

363, Issue 6 (2016) Keywords: Bacteriophages Capsid Proteins Gene Order Genome, Viral Open Reading Frames Proteome Viral Proteins Virion Abstract: Bacteriophage ZF40 is the only currently available, ...

Deletion of Murid Herpesvirus 4 ORF63 Affects the Trafficking of Incoming Capsids toward the Nucleus.

tegument protein encoded by Kaposi’s sarcoma-associated herpesvirus open reading frame 63 (ORF63). To gain insight about the roles of ORF63 in the life cycle of a gammaherpesvirus, we generated null ...

Whole genome protein microarrays for serum profiling of immunodominant antigens of Bacillus anthracis.

challenged groups. However, a number of other chromosomally-located and plasmid encoded open reading frame proteins were also recognized by infected or exposed groups in comparison to controls. Some of these ...

Proteomic characterization of bovine herpesvirus 4 extracellular virions.

preparations allowed us to define protein localization. In parallel, in order to identify some previously undefined open reading frames, we mapped peptides detected in whole virion lysates onto the six frames of ...

Selection and characterization of a candidate therapeutic bacteriophage that lyses the Escherichia coli O104:H4 strain from the 2011 outbreak in Germany.

Disease Outbreaks Escherichia coli Infections Germany Hemolytic-Uremic Syndrome Humans Open Reading Frames Shiga-Toxigenic Escherichia coli Abstract: In 2011, a novel strain of O104: H4 Escherichia coli ...

Overlapping signals for translational regulation and packaging of influenza A virus segment 2.

N40, from AUG s 1, 4 and 5 respectively. Two short open reading frames (sORFs) initiated by AUG s 2 and 3 are also present. To understand translational regulation in this system, we systematically ...

Isolation and purification of a new kalimantacin/batumin-related polyketide antibiotic and elucidation of its biosynthesis gene cluster

& purification IT journal Laboratories mechanism metabolism MODEL Molecular Sequence Data Multigene Family observed Open Reading Frames organic Organic Chemicals Peptide Synthases pharmacology ...

The major portal of entry of koi herpesvirus in Cyprinus carpio is the skin.

expression cassette inserted in the intergenic region between open reading frame (ORF) 136 and ORF 137. Two viral strains were then reconstituted from the modified plasmid, the FL BAC 136 LUC excised strain ...

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