Search results - 13 results

Application of a strain-level shotgun metagenomics approach on food samples: resolution of the source of a Salmonella food-borne outbreak

analysis, we could prove, without isolation, that Salmonella was present in both samples, and we obtained an inferred genome of a Salmonella enterica subsp. enterica serovar Enteritidis that could be linked ...

Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.

Salmonella; Salmonella enterica; Salmonella typhimurium; SNP; subtyping; whole genome sequencing Abstract: Whole genome sequencing represents a promising new technology for subtyping of bacterial pathogens. ...

Molecular Subtyping of Salmonella Typhimurium with Multiplex Oligonucleotide Ligation-PCR (MOL-PCR).

Salmonella enterica subsp. enterica serovar Typhimurium (S. Typhimurium) and its monophasic variant S. 1, 4[5],12:i:- from DNA isolation through heat lysis up to data interpretation through a Gödel Prime ...

Data analysis associated with the use of whole genome sequencing for subtyping of pathogenic microorganisms, Salmonella Typhimurium as a case study

result results routine Salmonella Salmonella enterica Salmonella typhimurium Science situation SOCIAL Species Still study Subtyping subtyping of isolates Surveillance use WGS whole genome whole genome ...

A multiplex oligonucleotide ligation-PCR as a complementary tool for subtyping of Salmonella Typhimurium

resistance result results S Salmonella Salmonella enterica Salmonella typhimurium stability Subtyping Surveillance Technique Type use VALIDATION Abstract: Subtyping below the serovar level is essential for ...

Evaluation of whole genome sequencing for routine subtyping of Salmonella Typhimurium for surveillance and outbreak investigation

Phenotype resistance routine S Salmonella Salmonella enterica Salmonella typhimurium Shigella situation Species study Subtyping Surveillance Technique technology whole genome whole genome sequencing Abstract: ...

Evaluation of viability-qPCR detection system on viable and dead Salmonella serovar Enteritidis.

of the viability PCR rapidly came out in the literature. In this study, the use of PMA in a viability-qPCR (v-qPCR) was assessed on viable and dead cells of Salmonella enterica subsp. enterica serovar ...

Genome Sequence of the Salmonella enterica subsp. enterica Serovar Namur Strain 05-2929, Lacking the Salmonella Atypical Fimbrial Operon.

Abstract: This paper announces the genome sequence and annotation of Salmonella enterica subsp. enterica serovar Namur strain 05-2929. S. Namur is a new serovar (39:z4,z23:-) that was isolated from a patient ...

A proteomics approach for the quantification of Staphylococcus aureus enterotoxins a and b in several matrices using uplc-msms analysis.

Staphylococcus aureus symposium Abstract: In number of foodborne outbreaks S. aureus intoxications stand highly ranked next to those caused by other pathogens like Bacillus cereus, Escherichia coli, Salmonella ...

MLVA as a tool for public health surveillance of human Salmonella Typhimurium: prospective study in Belgium and evaluation of MLVA loci stability.

Surveillance Salmonella Infections Salmonella typhimurium Abstract: Surveillance of Salmonella enterica subsp. enterica serovar Typhimurium (S. Typhimurium) is generally considered to benefit from molecular ...

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