Search results - 70 results

Optimised long-read sequence bioinformatics tool for the analysis of the resistome and microbial communities

https://doi.org/10.5281/zenodo.7433258 Keywords: Antimicrobial resistance bioinformatics Long read metagenomic sequencing Microbial community Resistome Health Topics:  Antimicrobial resistance (AMR) Food consumption and food safety ...

Report on initial findings of on-site diagnostic tests and IT solutions for human clinical, veterinary and environmental samples for early warning of emerging resistant pathogens

https://doi.org/10.5281/zenodo.7433281 URL: https://doi.org/10.5281/zenodo.7433281 Keywords: Long read metagenomics Metagenome On-site metagenomics Health Topics:  Antimicrobial resistance (AMR) Food consumption and food safety Animal ...

Introduction of WGS in food microbiology: advantages and challenges

Keywords: antimicrobial resistance (AMR) Food Safety foodborne outbreak investigation Monitoring SciCom Whole genome sequencing (WGS) Abstract: In October 2021 the Scientific Committee of the Federal Agency ...

Shotgun metagenomics as a ONE Health tool for better protecting human health

composing genes such as virulence or antimicrobial resistance (AMR) genes, without prior knowledge, nor the need to isolate. Such approaches could offer efficient and fast solutions to limitations faced by ...

Development of a real-time PCR marker targeting a new unauthorized genetically modified microorganism producing protease identified by DNA walking

Microbiology, Volume 354 (2021) Keywords: Antimicrobial resistance genes DNA walking anchored on pUB110 food and feed safety Genetically modified bacteria Protease real-time PCR detection Abstract: A PCR-based ...

A molecular assay for rapidly distinguishing the AviPro SALMONELLA VAC T vaccine strain from wild-type field isolates

wild-type Salmonella ser. Typhimurium isolates is essential for the monitoring of veterinary isolates and targeted control actions. The distinction between the two strain types is routinely made by phenotypic antimicrobial ...

Review on current scientific literature and overview of commercially available methods for on-site DNA isolation

https://doi.org/10.5281/zenodo.4724557 Keywords: AMR Antimicrobial resistance DNA isolation literature review metagenomic On-site Health Topics:  Health and disease monitoring Food consumption and food safety Animal health Health and ...

Antimicrobial Consumption in Belgium: 10-year evolution (2010-2019) in the community, nursing homes and hospitals

D/2021/14.440/10 Keywords: antimicrobial consumption Belgium Health Topics:  Antibiotics Antibiotiques Antibiotica Manuscript versions:  DOI:  http://x File:  Version:  Published Full text access:  Public Access ...

A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products

microbial fermentation products shotgun metagenomics Abstract: The presence of a genetically modified microorganism (GMM) or its DNA, often harboring antimicrobial resis- tance (AMR) genes, in microbial ...

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