Search results - 11 results

Listeria surveillance in Belgium

evolution in molecular typing, the NRC completely switched to Whole-Genome-Sequencing (WGS) for cluster detection. Therefore, an in-house Galaxy-based bio-informatic pipeline was developed. For the strain ...

The GMOseek matrix: a decision support tool for optimizing the detection of genetically modified plants

Van den Bulcke; Heinze,P.; Berben,G.; U. Busch; Nancy Roosens; Eric Janssen; Jana Zel; Kristina Gruden; Morisset,D. Source: BMC Bioinformatics, Volume 14, Issue 256, Number 14, p.1- 14 (2013) Keywords: ...

Capturing cooperative interactions with the PSI-MI format.

as evidenced by their growing occurrence in literature, they are currently lacking from the main bioinformatics resources. One of the contributing factors to this deficiency is the lack of ...

Immunogenicity of eight Mycobacterium avium subsp. paratuberculosis specific antigens in DNA vaccinated and Map infected mice.

Ag5, Ag6, MAP1637 c, MAP0388 and MAP3743 (identified by bioinformatic in silico screening of the Map genome). Strong, antigen-specific IFN-γ responses were induced in mice vaccinated with plasmid DNA ...

Attributes of short linear motifs.

different attributes will improve our understanding of the complexity of the interactome and aid development of bioinformatics tools for motif discovery. In this paper, the curated instances currently ...

The genome of cyprinid herpesvirus 3 encodes 40 proteins incorporated in mature virions.

relative abundance of the identified proteins in CyHV-3 virions. These analyses resulted in the identification of 40 structural proteins, which were classified based on bioinformatic analyses as capsid ...

Molecular genetics of para-aminosalicylic acid resistance in clinical isolates and spontaneous mutants of Mycobacterium tuberculosis.

distinct mutations were identified in the thyA gene and 3 in the dfrA coding region. Based on structural bioinformatics techniques, the altered ThyA proteins were predicted to generate an unfolded or ...

Encompassing new use cases- level 3.0 of the HUPO-PSI format for molecular interactions.

Y Yehudi; Kim Van Roey; S Orchard Source: BMC Bioinformatics, Volume 19, Issue 1 (2018) Keywords: Databases, Protein Humans Mutation Protein Interaction Maps Proteome Proteomics Systems Biology Abstract: ...

Exploring Short Linear Motifs Using the ELM Database and Tools.

Publication Type: Peer reviewed scientific article Authors: Marc Gouw; Hugo Sámano-Sánchez; Kim Van Roey; Francesca Diella; Toby J Gibson; Holger Dinkel Source: Curr Protoc Bioinformatics, Volume 58 ...

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