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Genomic epidemiology of emerging ESBL-producing Kentucky in Europe.

2013-2018 in eight European countries. Compared to other. Kentucky and non-typhoidal infections, reported to the European Surveillance System, these cases were more likely to be elderly and to present ...

Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination.

view of AMR gene localization, i.e., chromosomal or on a plasmid. Whole-genome and plasmid DNA extraction methods were compared, as were assemblies consisting of short reads (Illumina MiSeq), long reads ...

Time trend of prevalence and susceptibility to nitrofurantoin of urinary MDR Escherichia coli from outpatients

nitrofurantoin was compared between 2005 and 2011-12 using a generalized estimating equation model. Results:  MDR status could be determined for 9704 and 12512 urinary E. coli isolates from 7911 and 9441 patients ...

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