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Development of strain-level shotgun metagenomics approaches to detect and characterize microbiological contaminants in the context of food safety
had only rarely been associated with human cases of an outbreak, let alone during a real outbreak. Therefore, this PhD centered on the development of shotgun metagenomics methods to study ...
SARS-CoV-2 prevalence, seroprevalence and seroconversion among healthcare workers in Belgium during the 2020 COVID-19 outbreak (SARS-CoV-2 HCW): amended protocol
Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Laure Mortgat; Lydia Gisle; Rana Charafeddine; Ariën, Kevin K; Cyril Barbezange; Stefaan Demarest; I Desombere; Veronik Hutse; Isabelle Thomas; Vuylsteke, Bea; Els D ...
Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.
PLoS One, Volume 13, Issue 2 (2018) Keywords: bacterial phylogeny; food-borne; genes; NGS; WGS; computational biology/bioinformatics; disease outbreaks; outbreak; performance evaluation; pipeline; ...