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Introduction of WGS in food microbiology: advantages and challenges
Keywords: antimicrobial resistance (AMR) Food Safety foodborne outbreak investigation Monitoring SciCom Whole genome sequencing (WGS) Abstract: In October 2021 the Scientific Committee of the Federal Agency ...
Identification of diffusion routes of O/EA-3 topotype of foot-and-mouth disease virus in Africa and Western Asia between 1974 and 2019- a phylogeographic analysis.
Kassimi, Labib Bakkali-; Benfrid, Souheyla Source: Transbound Emerg Dis, Volume 69, Issue 5 (2022) Keywords: Animals Bayes Theorem Cattle Disease Outbreaks Foot-and-Mouth Disease Foot-and-Mouth Disease Virus ...
Shotgun metagenomics for strain-level food-borne outbreak investigation
Publication Type: Scientific poster, presentation or proceeding Authors: Florence E Buytaers Source: FoodMicro (2022) Service: Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in appli ...
Has Epizootic Become Enzootic? Evidence for a Fundamental Change in the Infection Dynamics of Highly Pathogenic Avian Influenza in Europe, 2021.
outbreaks that are part of the most recent autumn/winter 2021 epizootic, or (ii) further virus variants were reintroduced by migratory birds, and these two sources of reintroduction have driven the HPAI ...
The history of foot-and-mouth disease virus serotype C: the first known extinct serotype?Abstract
that are unevenly distributed in Asia, Africa, and South America. Despite the challenges of controlling FMD, since 1996 there have been only two outbreaks attributed to serotype C, in Brazil and in ...
Shotgun metagenomics as a ONE Health tool for better protecting human health
conventional methods in e.g. the field of pathogen detection/characterization along the food chain, starting from the food production environment (including detection of AMR genes) until foodborne outbreak ...
Development, evaluation and optimization of next generation sequencing data analysis tools in support of a fast response for public health and food chain safety
Publication Type: Dissertation Authors: Assia Saltykova Source: Ghent University, Ghent, Belgium, p.308 (2022) Keywords: bioinformatics tools Database GMO Metagenomics NGS outbreak investigation ...
Outbreaks of Foot-and-Mouth Disease in Burundi, East Africa, in 2016, Caused by Different Serotypes.
Animals Burundi Cattle Cattle Diseases Disease Outbreaks Foot-and-Mouth Disease Foot-and-Mouth Disease Virus Phylogeny Seroepidemiologic Studies Serogroup Abstract: Burundi is a small, densely populated ...
Ready to resolve the next foodborne outbreaks fastly without isolation using metagenomics
Publication Type: Scientific poster, presentation or proceeding Authors: Florence E Buytaers Source: Be Ready symposium, Issue Sciensano (2022) Service: Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Trans ...
Outbreak of invasive meningococcal disease caused by a meningococcus serogroup B in a nursery school, Wallonia, Belgium, 2018
Publication Type: Peer reviewed scientific article Authors: Stéphanie Jacquinet; Wesley Mattheus; Sophie Quoilin; Chloé Wyndham-Thomas; Charlotte Martin; Dimitri Van der Linden; André Mulder; Julie Frère; Schirvel, Carole Source: Eurosurveillance, Volume ...