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pathogens genomics

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BSFM 2023- L. monocytogenes in Plant-Based Foods: insights from of a recent foodborne outbreak linked to vegan alternative to cheese

following ISO 11290 – 1 and – 2. A human strain was collected at the NRC Listeria. All isolated strains underwent serotyping for further characterisation at the NRC Listeria, and Whole Genome Sequencing (WGS) ...

Strain-level characterization without culture enrichment? Easing and accelerating outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling

analysing the DNA of the sample, it can identify the presence of various pathogens to the strain level. Moreover, adaptive sampling is a new tool proposed during nanopore sequencing to target certain DNA ...

Shotgun metagenomics as a ONE Health tool for better protecting human health

conventional methods in e.g. the field of pathogen detection/characterization along the food chain, starting from the food production environment (including detection of AMR genes) until foodborne outbreak ...

Molecular subtyping of Salmonella Typhimurium with multiplex oligonucleotide ligation-PCR (MOL-PCR)

subtyping Multiplex assay ON pathogen PCR PRODUCTS protocol S Salmonella Salmonella enterica Salmonella typhimurium Subtyping Technique Type Viruses Abstract: A multiplex oligonucleotide ligation- PCR (MOL- ...

Development of xMAP and xTAG Luminex assays for public health surveillance

(2016) Keywords: Development health Indoor air Luminex pathogen public public health Public-health Subtyping Health Topics:  Health and disease monitoring Surveillance de la santé et des maladies Ziekten ...

Molecular and clinical investigation of Zika virus outbreak in New Caledonia

Molecular neurological non-invasive ON outbreak outbreak investigation pathogen public public health Public-health region result results Rna Sample Samples SENSITIVITY serum Spread strain time urine VIRUS WHO ...

Design of multiplex assays for molecular subtyping of pathogens with the Luminex xMAP technology

IT limitation Limitations Luminex microorganism microorganisms Molecular molecular subtyping Multiplex assay Oligonucleotides outbreak outbreaks pathogen reducing regulation Sample SOFTWARE specificity ...

Development of qPCR screening methods to be used in a combinatory system to detect food-borne pathogens

(2011) Keywords: a challenge CHALLENGES combinatory Development foodborne pathogenes global Global Health health International meeting method methods Network pathogen qPCR SCREENING Screening method ...

A combinatory qPCR screening system to detect food-borne pathogens.

Society for Food Microbiology, NA, p.132 (2011) Keywords: a combinatory conference Development food Food Microbiology foodborne pathogenes method methods microbiology ON pathogen qPCR SCREENING SYBR(r)Green ...

A combinatory qPCR screening system to detect food-borne pathogens.

The Society for Applied Microbiology (SfAM), Number 22, NA, p.21- 22 (2011) Keywords: a combinatory food Food Microbiology foodborne pathogenes meeting microbiology pathogen qPCR SCREENING SYBR(r)Green ...

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