Search results - 10 results

Study of the underlying mechanisms and consequences of pathogenicity differences between two in vitro selected G1-H9N2 clones originating from a single isolate.

Volume 50, Issue 1 (2019) Keywords: Animals Chickens Gene Expression Regulation Genome, Viral Hemagglutination Inhibition Tests Immunity, Innate In Vitro Techniques Influenza A Virus, H9N2 Subtype ...

Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.

Salmonella; Salmonella enterica; Salmonella typhimurium; SNP; subtyping; whole genome sequencing Abstract: Whole genome sequencing represents a promising new technology for subtyping of bacterial pathogens ...

Comparative genomics of quinolone‐resistant and susceptible Campylobacter jejuni of poultry origin from major poultry producing European countries (GENCAMP)

Voedselpathogenen Foodborne pathogens Manuscript versions:  DOI:  https://doi.org/10.2903/sp.efsa.2018.EN-1398 File:  Version:  Published Full text access:  Restricted Access Full text language:  English Category:  ...

Detection of Plasmid-Mediated Colistin Resistance, mcr-1 and mcr-2 Genes, in Salmonella spp. Isolated from Food at Retail in Belgium from 2012 to 2015.

mcr-2 determinant has been confirmed by whole genome sequencing and allowed the localization of these two genes on IncX4 type plasmids. We report here the presence of mcr-1 and the first mcr-2 gene in ...

Survey on the Use of Whole-Genome Sequencing for Infectious Diseases Surveillance: Rapid Expansion of European National Capacities, 2015-2016.

identified as EU priorities. The sampling frame as well as bioinformatics analysis varied by pathogen/resistance issue and country. Core genome multilocus allelic profiling, also called cgMLST, was the most ...

Travel- and community-based transmission of multidrug-resistant Shigella sonnei lineage among international orthodox jewish communities

pathogen POPULATION risk S SB- IM Shigella Shigella sonnei Species Spread State States strain Transmission Travel trend trends United Kingdom United States United-kingdom whole genome Abstract: Shigellae are ...

Molecular subtyping of Salmonella Typhimurium with multiplex oligonucleotide ligation-PCR (MOL-PCR)

subtyping Multiplex assay ON pathogen PCR PRODUCTS protocol S Salmonella Salmonella enterica Salmonella typhimurium Subtyping Technique Type Viruses Abstract: A multiplex oligonucleotide ligation- PCR (MOL- ...

Optimized MOL-PCR for Characterization of Microbial Pathogens

Oligonucleotide Probes Phycoerythrin polymerase chain reaction Polymorphism, Single Nucleotide Salmonella typhimurium Streptavidin Temperature Abstract: Characterization of microbial pathogens is necessary for ...

Whole Genome Sequence Analysis of Salmonella Enteritidis PT4 Outbreaks from a National Reference Laboratory's Viewpoint.

Brussels Case case studies Case study case-study Common data Discussion disease Diseases electronic epidemiology expertise food foodborne outbreaks future gene Genetic genetics Genome genomic Genomics health ...

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