Search results - 14 results

Study of the underlying mechanisms and consequences of pathogenicity differences between two in vitro selected G1-H9N2 clones originating from a single isolate.

Volume 50, Issue 1 (2019) Keywords: Animals Chickens Gene Expression Regulation Genome, Viral Hemagglutination Inhibition Tests Immunity, Innate In Vitro Techniques Influenza A Virus, H9N2 Subtype ...

Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.

Salmonella; Salmonella enterica; Salmonella typhimurium; SNP; subtyping; whole genome sequencing Abstract: Whole genome sequencing represents a promising new technology for subtyping of bacterial pathogens ...

Comparative genomics of quinolone-resistant and susceptible Campylobacter jejuni of poultry origin from major poultry producing European countries (GENCAMP)

Frank M. Aarestrup Source: EFSA Supporting PublicationsEFSA Supporting PublicationsEFSA Supporting Publications, Volume 15, Issue 5 (2018) ISBN: 2397-8325 Keywords: Campylobacter Europe Genomics Poultry ...

Comparative genomics of quinolone‐resistant and susceptible Campylobacter jejuni of poultry origin from major poultry producing European countries (GENCAMP)

Voedselpathogenen Foodborne pathogens Manuscript versions:  DOI:  https://doi.org/10.2903/sp.efsa.2018.EN-1398 File:  Version:  Published Full text access:  Restricted Access Full text language:  English Category:  ...

Detection of Plasmid-Mediated Colistin Resistance, mcr-1 and mcr-2 Genes, in Salmonella spp. Isolated from Food at Retail in Belgium from 2012 to 2015.

mcr-2 determinant has been confirmed by whole genome sequencing and allowed the localization of these two genes on IncX4 type plasmids. We report here the presence of mcr-1 and the first mcr-2 gene in ...

Survey on the Use of Whole-Genome Sequencing for Infectious Diseases Surveillance: Rapid Expansion of European National Capacities, 2015-2016.

identified as EU priorities. The sampling frame as well as bioinformatics analysis varied by pathogen/resistance issue and country. Core genome multilocus allelic profiling, also called cgMLST, was the most ...

Travel- and community-based transmission of multidrug-resistant Shigella sonnei lineage among international orthodox jewish communities

pathogen POPULATION risk S SB- IM Shigella Shigella sonnei Species Spread State States strain Transmission Travel trend trends United Kingdom United States United-kingdom whole genome Abstract: Shigellae are ...

Molecular subtyping of Salmonella Typhimurium with multiplex oligonucleotide ligation-PCR (MOL-PCR)

subtyping Multiplex assay ON pathogen PCR PRODUCTS protocol S Salmonella Salmonella enterica Salmonella typhimurium Subtyping Technique Type Viruses Abstract: A multiplex oligonucleotide ligation- PCR (MOL- ...

Optimized MOL-PCR for Characterization of Microbial Pathogens

Oligonucleotide Probes Phycoerythrin polymerase chain reaction Polymorphism, Single Nucleotide Salmonella typhimurium Streptavidin Temperature Abstract: Characterization of microbial pathogens is necessary for ...

Whole Genome Sequence Analysis of Salmonella Enteritidis PT4 Outbreaks from a National Reference Laboratory's Viewpoint.

Brussels Case case studies Case study case-study Common data Discussion disease Diseases electronic epidemiology expertise food foodborne outbreaks future gene Genetic genetics Genome genomic Genomics health ...

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