Search results - 77 results

Genomic monitoring of SARS-CoV-2 variants using sentinel SARI hospital surveillance.

Issue 10 (2023) Keywords: COVID-19 Genomics hospitals Humans Pandemics Pneumonia SARS-CoV-2 Sentinel Surveillance Abstract: BACKGROUND: To support the COVID-19 pandemic response, many countries, including ...

RNA sequencing of avian paramyxovirus (Paramyxoviridae, Avulavirinae) isolates from wild mallards in Belgium, 2021: complete genomes and coinfections.

importance of surveillance for poultry pathogens in wild birds. Beyond the insights from full genome characterization of virus isolates, untargeted RNA sequencing strategies provide additional insights in the ...

Transforming Shiga toxin-producing surveillance through whole genome sequencing in food safety practices.

Abstract: INTRODUCTION: Shiga toxin-producing (STEC) is a gastrointestinal pathogen causing foodborne outbreaks. Whole Genome Sequencing (WGS) in STEC surveillance holds promise in outbreak prevention and ...

A global genomic analysis of Salmonella Concord reveals lineages with high antimicrobial resistance in Ethiopia.

Nat Commun, Volume 14, Issue 1 (2023) Keywords: Anti-Bacterial Agents Drug Resistance, Bacterial Ethiopia Genomics Humans Salmonella Abstract: Antimicrobial resistant Salmonella enterica serovar Concord ...

Characterization of a Bacteriophage GEC_vB_Bfr_UZM3 Active against.

drug-resistant human pathogens, but cases of the refractory infections, caused by strains that are not susceptible to the common antibiotic regimes established for have been more frequently reported. ...

Development of strain-level shotgun metagenomics approaches to detect and characterize microbiological contaminants in the context of food safety

have always been analyzed and characterized after isolation. Since the advent of second generation sequencing, it has been possible to characterize the complete genome of these isolates to the SNP level. ...

Report on initial findings of on-site diagnostic tests and IT solutions for human clinical, veterinary and environmental samples for early warning of emerging resistant pathogens

et environnement Gezondheid en milieu Service:  Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Manuscript ...

First Belgian Report of Ertapenem Resistance in an ST11 Klebsiella Pneumoniae Strain Isolated from a Dog Carrying blaSCO-1 and blaDHA-1 Combined with Permeability Defects

(MLST) and the identification and localization of antimicrobial resistance (AMR) and virulence-associated genes. Three plasmids were reconstructed from the whole-genome sequence (WGS) data: the conjugative ...

Population Analysis of O26 Shiga Toxin-Producing Causing Hemolytic Uremic Syndrome in Italy, 1989-2020, Through Whole Genome Sequencing.

Hemolytic-Uremic Syndrome Humans ITALY Multilocus Sequence Typing Shiga-Toxigenic Escherichia coli whole genome sequencing Abstract: Shiga toxin-producing (STEC) belonging to the O26 serogroup represent an important ...

Evaluating genetic similarity between foodborne and household Bacillus cereus isolates

Foodborne pathogens kitchen sponge whole genome sequencing Service:  Pathogènes alimentaires Voedselpathogenen Foodborne pathogens Full text language:  English Category:  Scientific posters, presentations and ...

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