Search results - 264 results
Atypical Pathogenicity of Avian Influenza (H3N1) Virus Involved in Outbreak, Belgium, 2019
Publication Type: Peer reviewed scientific article Authors: Mieke Steensels; Philippe Lagacé-Wiens; Steven Van Borm; Thierry van den Berg; Corrigan, Tim; Virginie Roupie; Fabienne Rauw; Bénédicte ...
Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination.
Antibiotics (Basel), Volume 9, Issue 8 (2020) Keywords: Antimicrobial resistance MinION Plasmid sequencing Abstract: Antimicrobial resistance (AMR) is one of the most prominent public health threats. AMR genes ...
Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study.
Keersmaecker Source: Int J Mol Sci, Volume 21, Issue 16 (2020) Keywords: foodborne outbreak investigation public health strain-level metagenomics Abstract: Culture-independent diagnostics, such as metagenomic ...
A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.
toegepaste genomica Transversal activities in applied genomics Manuscript versions: DOI: https://doi.org/10.3390/microorganisms8081191 File: Version: Published Full text access: Public Access Full text ...
Use of Whole Genome Sequencing Data for a First in Silico Specificity Evaluation of the RT-qPCR Assays Used for SARS-CoV-2 Detection.
available, we used the bioinformatics tool SCREENED and a total of 4755 publicly available SARS-CoV-2 genomes, downloaded at two different time points, to evaluate the specificity of 12 RT-qPCR tests ...
The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.
Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Manuscript versions: DOI: https://doi.org/10.3390/foods9081030 File: Version: Published Full text access: Public ...
Use of a Whole Genome Sequencing-based approach for Mycobacterium tuberculosis surveillance in Europe in 2017-2019: an ECDC pilot study.
Publication Type: Peer reviewed scientific article Authors: Elisa Tagliani; Anthony, Richard; Thomas A Kohl; Albert de Neeling; Vlad Nikolayevskyy; Csaba Ködmön; Florian P Maurer; Stefan Niemann; ...
NAuRA: Genomic Tool to Identify Staphylococcal Enterotoxins in Strains Responsible for FoodBorne Outbreaks.
evolutionary history of strains. This study presents a pioneering method to investigate strains isolated from food at the genomic level and to analyze the diversity of all 27 SE-coding genes together. Health ...
Towards a unified classification for human respiratory syncytial virus genotypes.
Publication Type: Peer reviewed scientific article Authors: Kaat Ramaekers; Annabel Rector; Lize Cuypers; Philippe Lemey; Els Keyaerts; Van Ranst, Marc Source: Virus Evol, Volume 6, Issue 2 (2020) ...
Phylogeography of Human and Animal Strains: Genetic Fingerprinting of Q Fever in Belgium.
/ MLVA B strain was classified as ST33 and genomic group II. In conclusion, Q fever is widespread in all Belgian domestic ruminants and in alpaca. We determined that the public health risk in Belgium is ...