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Validation of a Bioinformatics Workflow for Routine Analysis of Whole-Genome Sequencing Data and Related Challenges for Pathogen Typing in a European National Reference Center: as a Proof-of-Concept.
being a well-established research method, the use of whole-genome sequencing (WGS) for routine molecular typing and pathogen characterization remains a substantial challenge due to the required ...
Detailed Evaluation of Data Analysis Tools for Subtyping of Bacterial Isolates Based on Whole Genome Sequencing: as a Proof of Concept.
Volume 10 (2019) Abstract: Whole genome sequencing is increasingly recognized as the most informative approach for characterization of bacterial isolates. Success of the routine use of this technology in ...
Development of a real-time PCR method for the genoserotyping of Salmonella Paratyphi B variant Java.
to obtain an accurate identification of a S. Paratyphi B serotype and its D-tartrate fermenting profile, which is needed in routine laboratories for fast and efficient diagnostics. Health Topics: ...
Development and validation of chromatographic methods for screening and subsequent quantification of suspected illegal antimicrobial drugs encountered on the Belgian market.
validated. These methods could be used for routine analysis and enable a more in-depth characterization of SF-antimicrobials. According to their popularity as SF-antimicrobials, 31 antibiotics, 3 antibacterial ...
Development and validation of chromatographic methods for screening and subsequent quantification of suspected illegal antimicrobial drugs encountered on the Belgian market
(UHPLC- MS2) and diode array detection (UHPLC- DAD), respectively were developed and validated. These methods could be used for routine analysis and enable a more in-depth characterization of ...
Comparison of matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF MS) systems for the identification of moulds in the routine microbiology laboratory.
Microflex LT (MLT) — and the MSI application. METHODS: Moulds were collected retrospectively and prospectively to display epidemiological diversity of a microbiology laboratory. All of them were identified ...
Development and validation of an integrated DNA walking strategy to detect GMO expressing cry genes
bidirectional DNA walking method anchored on the CryAb/c genes can easily be implemented in GMO routine analysis by the enforcement laboratories and allows completing the entire DNA walking strategy in targeting ...
How To: Identify Non-Tuberculous Mycobacterium Species By Using Maldi-Tof Mass Spectrometry.
Abstract: BACKGROUND: The implementation of MALDI- TOF MS for microorganism identification has changed the routine of the microbiology laboratories as we knew it. Most microorganisms can now be reliably ...
Hepatitis E virus serology and PCR: does the methodology matter?
emerging pathogen in the developed world. As the clinical manifestations and routine laboratory parameters are often nonspecific, accurate diagnostic tests are crucial. In the current study, the performance ...
Influence of apixaban on commonly used coagulation assays: results from the Belgian national External Quality Assessment Scheme.
clinical laboratories with useful information on the impact of apixaban on their routine coagulation assays. Manuscript versions: File: Version: Published Full text access: Restricted Access Full text ...