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MALDI-TOF Mass Spectrometry Online Identification of Using the MSI-2 Application.

strains, we added 142 references corresponding to 12 strains inside the complex in the online MSI-2 database, of which 3 are strains. The resulting database was tested with 1566 spectra of 67 isolates from ...

Introduction of WGS in food microbiology: advantages and challenges

expertise. Only by putting the WGS-based results, the epidemiological evidence and the strains metadata together can a hypothesis be formulated. Further care should be given to the communication of these ...

First Belgian Report of Ertapenem Resistance in an ST11 Klebsiella Pneumoniae Strain Isolated from a Dog Carrying blaSCO-1 and blaDHA-1 Combined with Permeability Defects

Publication Type: Peer reviewed scientific article Authors: Hanne Debergh; Margo Maex; Cristina Garcia-Graells; Cécile Boland; Saulmont, Marc; Koenraad Van Hoorde; Saegerman, Claude Source: Antibiotics, Volume 11, Issue 9 (2022) Keywords: antimicrobial re ...

Genomic epidemiology of persistently circulating MDR Shigella sonnei strains associated with men who have sex with men (MSM) in Belgium (2013–19)

both. Men were at higher risk of carrying a double resistant S. sonnei strain, compared with women (risk ratio = 8.6, 95% CI = 5.4-13.9). Phylogenetic analysis revealed four independent Belgian clusters ...

Identification of diffusion routes of O/EA-3 topotype of foot-and-mouth disease virus in Africa and Western Asia between 1974 and 2019- a phylogeographic analysis.

evolutionary phylodynamics of the causative serotype O viral strains all belonging to the East-Africa 3 topotype (O/ EA-3). We analyzed a total of 489 sequences encoding the FMDV VP1 genome region generated from ...

Shotgun metagenomics for strain-level food-borne outbreak investigation

Publication Type: Scientific poster, presentation or proceeding Authors: Florence E Buytaers Source: FoodMicro (2022) Service:  Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in appli ...

The history of foot-and-mouth disease virus serotype C: the first known extinct serotype?Abstract

between 1957 and 2004. Many serotype C viruses from European and Kenyan outbreaks were closely related to vaccine strains, including the most recently recovered Kenyan isolate from 2004. International ...

Meningococcal pericarditis caused by the MenW:cc11 strain in an older adult.

incidence is being observed. REPORT: An older adult presenting with acute onset shortness of breath, chest pain and fever, was diagnosed with pericarditis with meningococcemia due to MenW: ST11 strain. MenW ...

Validation of Fourier Transform Infrared Spectroscopy for Serotyping of Streptococcus pneumoniae.

transform infrared (FT- IR) spectroscopy (IR Biotyper; Bruker) allows highly discriminatory fingerprinting of closely related bacterial strains. In this study, FT- IR spectroscopy-based capsular typing of ...

Population Analysis of O26 Shiga Toxin-Producing Causing Hemolytic Uremic Syndrome in Italy, 1989-2020, Through Whole Genome Sequencing.

this study we describe the genomic characterization and population structure of 144 O26 STEC strains isolated from human sources in Italy in the period 1989-2020. A total of 89 strains belonged to ST21, ...

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