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Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.
Salmonella; Salmonella enterica; Salmonella typhimurium; SNP; subtyping; whole genome sequencing Abstract: Whole genome sequencing represents a promising new technology for subtyping of bacterial pathogens. ...
The added value of whole genome sequencing for the development of a specific detection method for an EU-unauthorized genetically modified Bacillus subtilis overproducing riboflavin
the impact of Whole Genome Sequencing (WGS) on food safety management: within a one health framework, NA, Issue FAO/GMI, NA (2016) Keywords: a an Bacillus Bacillus subtilis detection detection method ...
The use of whole genome sequencing (WGS) for typing of bacterial pathogenic isolates
Genome ON pathogenic Societies Society use WGS whole genome whole genome sequencing Health Topics: Food consumption and food safety Consommation et sécurité alimentaires Voedselconsumptie en –veiligheid ...
Strategies to detect unauthorized GMO in the food and feed chain (PhD thesis)
https://www.sciensano.be/en/biblio/strategies-detect-unauthorized-gmo-food-and-feed-chain-phd-thesis
technology, through a whole genome sequencing (WGS) approach, was also investigated. As this last approach does not theoretically require any prior information about the targeted sequences, GMO composed only of ...
Data analysis associated with the use of whole genome sequencing for subtyping of pathogenic microorganisms, Salmonella Typhimurium as a case study
sequencing Abstract: As the cost of bacterial whole genome sequencing (WGS) by NGS continues to decline, its application for routine (sub)typing of pathogenic microorganisms quickly becomes a reality. NGS ...
Evaluation of whole genome sequencing for routine subtyping of Salmonella Typhimurium for surveillance and outbreak investigation
Phenotype resistance routine S Salmonella Salmonella enterica Salmonella typhimurium Shigella situation Species study Subtyping Surveillance Technique technology whole genome whole genome sequencing Abstract: ...