Search results - 61 results

Evolutionary history and global spread of the Mycobacterium tuberculosis Beijing lineage20

99 countries and whole-genome sequencing of 110 representative isolates. We show that this lineage initially originated in the Far East, from where it radiated worldwide in several waves. We detected ...

Evaluation of whole genome sequencing for routine subtyping of Salmonella Typhimurium for surveillance and outbreak investigation

Phenotype resistance routine S Salmonella Salmonella enterica Salmonella typhimurium Shigella situation Species study Subtyping Surveillance Technique technology whole genome whole genome sequencing Abstract: ...

Genome sequence of the Salmonella enterica subsp. enterica serovar Namur strain 05-2929, lacking the Salmonella atypical fimbrial operon.5090

public health, NA, Issue =WIV-ISP, NA (2014) Keywords: application applications Genome health Operon public public health Public-health Salmonella Salmonella enterica serovar Namur shortgun strain whole ...

Laboratory capability for molecular detection and confirmation of novel coronavirus in Europe, November 2012287

other target RT- PCR assays with sequence analysis or whole-genome sequence analysis was available in 22/46 responding countries of which 18/30 in EU / EEA  countries Service:  Virale ziekten Viral ...

DNase SISPA-next generation sequencing confirms Schmallenberg virus in Belgian field samples and identifies genetic variation in Europe.

4.27-4.89 log(10) RNA copies per µL did not allow identification using DN ase SISPA- NGS. This partial sequence information was compared to the whole genome sequence of SBV isolated from bovines in Germany, ...

Monitoring of influenza: Whole-Genome Sequencing to provide insights in the disease severity

Publication Type: Scientific poster, presentation or proceeding Authors: Laura Van Poelvoorde; Sigrid De Keersmaecker; Kevin Vanneste; Steven Van Gucht; Isabelle Thomas; Xavier Saelens; Cyril Barbezange; Nancy Roosens Source: The 6th International Influen ...

Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates.

Keersmaecker, S C J * Source: Sci Rep, Volume 10, Issue 1 (2020) Keywords: NGS pathogenic E. coli STEC WGS Abstract: Whole genome sequencing (WGS) has proven to be the ultimate tool for bacterial isolate ...

Development of a bioinformatics pipeline for the routine analysis of Influenza whole genome sequencing data

Publication Type: Scientific poster, presentation or proceeding Authors: Qiang Fu; Raf Winand; Julien Van Braekel; Cyril Barbezange; Veronik Hutse; Isabelle Thomas; Steven Van Gucht; Sigrid C.J. De Keersmaecker; Nancy Roosens; Kevin Vanneste Source: Europ ...

Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei.

to several key antimicrobials, including the fluoroquinolones. Here we analyse nearly 400 S. sonnei whole genome sequences from both endemic and non-endemic regions to delineate the evolutionary ...

QR code

QR code for this page URL