Résultats de la recherche - 35 results

Strain-level characterization without culture enrichment? Easing and accelerating outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling

Publication Type: Scientific poster, presentation or proceeding Authors: Florence E Buytaers; Bavo Verhaegen; Tom Van Nieuwenhuysen; Nancy Roosens; Kevin Vanneste; Kathleen Marchal; Sigrid C.J. De ...

Targeted High-Throughput Sequencing Enables the Detection of Single Nucleotide Variations in CRISPR/Cas9 Gene-Edited Organisms

Sigrid C.J. De Keersmaecker; Kevin Vanneste; Nancy Roosens Source: Foods, Volume 12, Issue 3 (2023) Keywords: CRISPR/Cas9 detection food and feed chain Genetically modified organism high-throughput ...

Report on the feasibility of using Hi-C sequencing for metagenomics to define the context of AMR genes

Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Sigrid C.J. De Keersmaecker; Josephine Grützke; Carlus Deneke; Jennie Fischer; Lee Julia Bartsch; Bram ...

Optimised long-read sequence bioinformatics tool for the analysis of the resistome and microbial communities

Bosco Rodríguez Matamoros; Nancy Roosens; Sigrid C.J. De Keersmaecker Source: OpenAIRE, Zenodo, p.12 (2022) Accession Number: https://doi.org/10.5281/zenodo.7433258 URL: ...

Shotgun metagenomics as a ONE Health tool for better protecting human health

Piérard; Bert Bogaerts; Kathleen Marchal; The FARMED consortium; Nancy Roosens; Kevin Vanneste; Sigrid C.J. De Keersmaecker Source: EFSA One, Issue EFSA (2022) Abstract: Introduction: Open approaches to ...

Listeria monocytogenes isolates from Cornu aspersum snails: Whole genome-based characterization and host-pathogen interactions in a snail infection model.

Publication Type: Peer reviewed scientific article Authors: Kotzamanidis, Charalampos; Malousi, Andigoni; Esmeralda Dushku; Alexandre Dobly; Sigrid C.J. De Keersmaecker; Nancy Roosens; Karathodorou, ...

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