Résultats de la recherche - 9 results

Transforming Shiga toxin-producing surveillance through whole genome sequencing in food safety practices.

circulating STEC strains and by illustrating its benefits, it aims to incite policymakers to support WGS uptake in food safety surveillance. Health Topics:  Pathogene E. coli Pathogenic E. coli E. coli ...

A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.

human cases, demonstrating the power of shotgun metagenomics for rapid outbreak investigation and source tracking. Health Topics:  E. coli pathogènes (toxi-)infection alimentaire (TIA) Pathogene E. coli ...

The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.

interpreting isolate relationships to outbreaks, and leveraging the true benefit of WGS in outbreak investigation and/or prevention. Health Topics:  Pathogenic E. coli Food-borne illness Pathogene E. coli E. ...

Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates

challenges of standardizing protocols to support data portability and to enable full exploitation of its potential. Health Topics:  Pathogenic E. coli Pathogene E. coli E. coli pathogènes Manuscript versions:  ...

Global and regional source attribution of Shiga toxin-producing Escherichia coli infections using analysis of outbreak surveillance data

Topics:  Pathogene E. coli Pathogenic E. coli E. coli pathogènes Service:  Information sanitaire Gezondheidsinformatie Health information Manuscript versions:  DOI:  https://doi.org/10.1017/S095026881900116X ...

Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates.

C.J. De Keersmaecker Source: Sci Rep, Volume 10, Issue 1 (2020) Keywords: NGS pathogenic E. coli STEC WGS Abstract: Whole genome sequencing (WGS) has proven to be the ultimate tool for bacterial isolate ...

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