Résultats de la recherche - 50 results
Shifting national surveillance of Shigella infections toward geno-serotyping by the development of a tailored Luminex assay and NGS workflow.
observation spurred the development of an in silico workflow which extracts the Shigella serotype from Next-Generation Sequencing (NGS) data, taking into account gene functionality. Both tools will be ...
Seasonal Genetic Drift of Human Influenza A Virus Quasispecies Revealed by Deep Sequencing
has increased with the development of next generation sequencing (NGS) technologies that allow a more in-depth study of the genetic variability. NGS deep sequencing methodologies were applied to ...
Complete Genome Sequence of the Lumpy Skin Disease Virus Isolated from the First Reported Case in Greece in 2015
Serafeim C.; Dovas, Chrysostomos I.; Steven Van Borm; Chondrokouki, Eleni D.; Kris De Clercq Source: Genome Announcements, Volume 5, Issue 29 (2017) Keywords: Illumina LSDV Lumpy skin disease NGS WGS Health ...
Roadbook for the implementation of next-generation sequencing in clinical practice in oncology and hemato-oncology in Belgium.
challenges and requires a clear action plan. Such an action plan, as outlined in this paper, was developed in Belgium and includes steps in ensuring the quality and indications of NGS testing, installing data ...
Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.
PLoS One, Volume 13, Issue 2 (2018) Keywords: bacterial phylogeny; food-borne; genes; NGS; WGS; computational biology/bioinformatics; disease outbreaks; outbreak; performance evaluation; pipeline; ...
Nanopore sequencing technology: a new route for the fast detection of unauthorized GMO.
the feasibility to integrate the described workflow with the MinION Next-Generation-Sequencing (NGS). The MinION sequencing platform can provide long read-lengths and deal with heterogenic DNA ...
Complete Genome Sequences of the Neethling-Like Lumpy Skin Disease Virus Strains Obtained Directly from Three Commercial Live Attenuated Vaccines
Van Borm; Kris De Clercq Source: Genome Announcements, Volume 4, Issue 6 (2016) Keywords: capripoxviridae long-range PCR Lumpy skin disease NGS pacbio sequencing SMRT WGS Health Topics: Animal health ...
Use of next‐generation sequencing in microbial risk assessment
High‐throughput tools such as next‐generation sequencing (NGS) could fill this gap. NGS approaches can be used to generate ample qualitative and quantitative data to be used in the risk assessment process. NGS ...
Correction for Mathijs et al., Complete Genome Sequences of the Neethling-Like Lumpy Skin Disease Virus Strains Obtained Directly from Three Commercial Live Attenuated Vaccines
Van Borm; Kris De Clercq Source: Genome Announcements, Volume 5, Issue 6 (2017) Keywords: LSDV Lumpy skin disease NGS PacBio WGS Health Topics: Animal health Santé animale Diergezondheid Manuscript ...
Great diversity in Mcr-1 encoding plasmids among human E. coli and Salmonella spp. isolates in Belgium
ESCMID, Volume 1, Issue ESCMID, Vienna, Austria (2017) Keywords: colistin resistance mcr-1 NGS Health Topics: Health and disease monitoring Surveillance de la santé et des maladies Ziekten en gezondheid in ...