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Shotgun metagenomics as a ONE Health tool for better protecting human health

a faster time frame. EFSA called for such proof-of-concepts in a recent opinion about the use of metagenomics for food safety.  Additionally, we showed that the use of long-read sequencing can help to ...

WGS- versus ORF5-Based Typing of PRRSV: A Belgian Case Study.

circulating PRRSV strains by means of sequencing is crucial for developing adequate control strategies. Most genetic studies only target the highly variable open reading frame (ORF) 5, for which an extensive ...

Use of Whole Genome Sequencing Data for a First in Silico Specificity Evaluation of the RT-qPCR Assays Used for SARS-CoV-2 Detection.

Keersmaecker Source: Int J Mol Sci, Volume 21, Issue 15 (2020) Keywords: Betacoronavirus Coronavirus Infections Databases, Genetic Genome, Viral Humans Open Reading Frames Pandemics Pneumonia, Viral ...

Towards a unified classification for human respiratory syncytial virus genotypes.

HRSV genomes (>12,000 bp) were downloaded from GenBank and divided into the two subgroups: HRSV-A and HRSV-B. From whole-genome alignments, the regions that correspond to the open reading frame of the ...

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