Résultats de la recherche - 36 results

A bioinformatics WGS workflow for clinical complex isolate analysis, validated using a reference collection extensively characterized with conventional methods and approaches.

Keersmaecker; Nancy Roosens; Marchal, Kathleen; Vanessa Mathys; Vanneste, Kevin Source: J Clin Microbiol (2021) Abstract: The use of whole genome sequencing (WGS) for routine typing of bacterial isolates has ...

Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination.

low-copy-carrying plasmid (>200 kb) was used. Hybrid assemblies of NGS data obtained from whole-genome DNA extractions of the original isolates resulted in the most complete reconstruction of plasmids. The optimal ...

Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing

Publication Type: Peer reviewed scientific article Authors: The CRyPTIC Consortium and the 100000 Genomes Project; Allix-Béguec, Caroline; Arandjelovic, Irena; Bi, Lijun; Beckert, Patrick; Bonnet, ...

Complete Genome Sequence of the Lumpy Skin Disease Virus Isolated from the First Reported Case in Greece in 2015

Serafeim C.; Dovas, Chrysostomos I.; S. Van Borm; Chondrokouki, Eleni D.; Kris De Clercq Source: Genome Announcements, Volume 5, Issue 29 (2017) Keywords: Illumina LSDV Lumpy skin disease NGS WGS Health ...

Complete Coding Sequences of One H9 and Three H7 Low-Pathogenic Influenza Viruses Circulating in Wild Birds in Belgium, 2009 to 2012

B Source: Genome Announcements, Volume 4, Issue 3 (2016) Health Topics:  Avian influenza Aviaire influenza Influenza aviaire Manuscript versions:  DOI:  https://mra.asm.org/content/4/3/e00540-16 File:  ...

Complete coding sequence of a novel picorna-like virus in a blackbird infected with Usutu virus.

Picornaviridae Infections Plants whole genome sequencing Abstract: Using random high-throughput RNA sequencing, the complete coding sequence of a novel picorna-like virus (a 9,228-nt contig containing 212,202 ...

Complete Genome Sequences of the Neethling-Like Lumpy Skin Disease Virus Strains Obtained Directly from Three Commercial Live Attenuated Vaccines

Borm; Kris De Clercq Source: Genome Announcements, Volume 4, Issue 6 (2016) Keywords: capripoxviridae long-range PCR Lumpy skin disease NGS pacbio sequencing SMRT WGS Health Topics:  Animal health Santé ...

Complete Genome Sequence of the Goatpox Virus Strain Gorgan Obtained Directly from a Commercial Live Attenuated Vaccine

4, Issue 5 (2016) Keywords: capripoxvirus complete genome goatpox virus gorgan strain GTPV Health Topics:  Animal health Santé animale Diergezondheid Manuscript versions:  DOI:  ...

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