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Strain-level characterization without culture enrichment? Easing and accelerating outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling

Publication Type: Scientific poster, presentation or proceeding Authors: Florence E Buytaers; Bavo Verhaegen; Tom Van Nieuwenhuysen; Nancy Roosens; Kevin Vanneste; Kathleen Marchal; Sigrid C.J. De ...

Whole Genome Sequencing Provides an Added Value to the Investigation of Staphylococcal Food Poisoning Outbreaks

Publication Type: Peer reviewed scientific article Authors: Stéphanie Nouws; Bert Bogaerts; Bavo Verhaegen; Sarah Denayer; Lasse Laeremans; Kathleen Marchal; Nancy Roosens; Kevin Vanneste; Sigrid ...

A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.

Publication Type: Peer reviewed scientific article Authors: Florence E Buytaers; Assia Saltykova; Sarah Denayer; Bavo Verhaegen; Kevin Vanneste; Nancy Roosens; Piérard, Denis; Marchal, Kathleen ...

Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates

Publication Type: Peer reviewed scientific article Authors: Stéphanie Nouws; Bert Bogaerts; Bavo Verhaegen; Sarah Denayer; Piérard, Denis; Marchal, Kathleen; Nancy Roosens; Kevin Vanneste; Sigrid ...

Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates.

Publication Type: Peer reviewed scientific article Authors: Stéphanie Nouws; Bert Bogaerts; Bavo Verhaegen; Sarah Denayer; Piérard, Denis; Marchal, Kathleen; Nancy Roosens; Kevin Vanneste; Sigrid ...

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