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The history of foot-and-mouth disease virus serotype C: the first known extinct serotype?Abstract

Issue 1 (2021) Keywords: extinction foot-and-mouth Phylogeny serotype C Abstract: Foot-and-mouth disease (FMD) is a highly contagious animal disease caused by an RNA virus subdivided into seven serotypes ...

Validation of Fourier Transform Infrared Spectroscopy for Serotyping of Streptococcus pneumoniae.

J Clin Microbiol, Volume 60, Issue 7 (2022) Keywords: bacteria Humans Pneumococcal Infections Serogroup Serotyping Spectroscopy, Fourier Transform Infrared Streptococcus pneumoniae Abstract: Fourier ...

Shotgun metagenomics as a ONE Health tool for better protecting human health

artificially contaminated food samples. It allowed the same characterization of the foodborne pathogen (serotyping, virulence genes, relatedness to other cases) as the conventional methods used in reference ...

Outbreaks of Foot-and-Mouth Disease in Burundi, East Africa, in 2016, Caused by Different Serotypes.

estimated at 87%. Antibodies against FMDV serotypes O (52%), A (44%), C (19%), SAT1 (36%), SAT2 (58%), and SAT3 (23%) were detected across the provinces. FMDV genome was detected in samples from five of the ...

Application of a strain-level shotgun metagenomics approach on food samples: resolution of the source of a Salmonella food-borne outbreak

conventional analysis based on isolation, serotyping and MLVA (multilocus variable number tandem repeat analysis) comparison, followed by whole-genome sequencing, to confirm the source of the contamination over ...

Selection and use of reference panels: a case study highlighting current gaps in the materials available for foot and mouth disease.

are required. These are to: reduce bias in estimates of the diagnostic sensitivity and inter-serotypic specificity of tests used to detect diverse strains of FMD virus (FMDV), provide bio-safe positive ...

Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing Technologies

serotyped. This was achieved by applying a bioinformatics method on the long reads using reference-based classification. The same result could be obtained after 24-h sequencing on the more recent lower output ...

Nearly Complete Genome Sequences of Two Bluetongue Viruses Isolated during the 2020 Outbreak in the Grand Duchy of Luxembourg.

virus serotype 8 (BTV-8) has been considered enzootic in France since 2018. Here, we report the nearly complete genome sequences of two BTV-8 isolates from the 2020 outbreak in the Grand Duchy ...

Salmonella prevalence and persistence in industrialized poultry slaughterhouses.

after evisceration, 23.3% (70/300) after chilling; on thighs, prevalence was 10.0% (24/240). Nine Salmonella serotypes were identified of which Salmonella Infantis was the most common serovar (53.8%), ...

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