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Evaluation of whole genome sequencing for routine subtyping of Salmonella Typhimurium for surveillance and outbreak investigation

Last updated on 22-8-2019 by Anonymous (niet gecontroleerd)
Voedselconsumptie en –veiligheid  

Scientific poster, presentation or proceeding

Engels

SCIENSANO

Auteurs

Wuyts,V.; Sophie Bertrand; Wesley Mattheus; Nancy Roosens; Marchal,K.; Sigrid C.J. De Keersmaecker

Trefwoorden

  1. a
  2. additional
  3. an
  4. analysi
  5. analysis
  6. Antibiotic
  7. Antibiotic resistance
  8. AS
  9. aspects
  10. in
  11. Belgian
  12. Hoofdlettergebruik
  13. data
  14. Diagnosis
  15. disease
  16. Ziekten
  17. Electrophoresis
  18. epidemiologie
  19. Evaluating
  20. EVALUATION
  21. Genome
  22. Genotype
  23. Human
  24. identify
  25. INFECTION
  26. Infectious
  27. Infectious diseases
  28. investigation
  29. IS
  30. LEVEL
  31. method
  32. national
  33. Next-generation sequencing
  34. NGS
  35. ORIGIN
  36. outbreak
  37. Phenotype
  38. resistance
  39. routine
  40. S
  41. Salmonella
  42. Salmonella enterica
  43. Salmonella typhimurium
  44. Shigella
  45. situation
  46. Diersoort
  47. study
  48. Subtyping
  49. Surveillance
  50. Technique
  51. technology
  52. whole genome
  53. whole genome sequencing

Samenvatting:

Characterisation of bacterial isolates beyond the species and subspecies level, i.e. subtyping, is necessary for surveillance of infectious diseases and is crucial to identify a link between the origin of an infection and the human isolate in case of outbreak situations.At the Belgian National Reference Centre (NRC) for
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