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Zoekresultaten - 20 results
Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes
Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Navickaite, Indre; Bartsch, Lee-Julia; Grützke, Josephine; Overballe-Petersen, Søren; Rasmussen, Astrid; Otani, Saria; ...
Development of a portable on-site applicable metagenomic data generation workflow for enhanced pathogen and antimicrobial resistance surveillanceAbstract
Publication Type: Peer reviewed scientific article Authors: Bram Bloemen; Mathieu Gand; Kevin Vanneste; Marchal, Kathleen; Nancy Roosens; Sigrid C.J. De Keersmaecker Source: Scientific Reports, ...
Comparison of 6 DNA extraction methods for isolation of high yield of high molecular weight DNA suitable for shotgun metagenomics Nanopore sequencing to detect bacteriaAbstractBackgroundResultsConclusion
Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Bram Bloemen; Kevin Vanneste; Nancy Roosens; Sigrid C.J. De Keersmaecker Source: BMC Genomics, Volume 24, Issue 1 (2023) ...
Report on an initial assessment of long-read sequencing for metagenome (community and AMR) analysis (defined community, spiked and real simple and complex matrices) and comparison to current short-read standard
Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Sigrid C.J. De Keersmaecker; Mathieu Gand; Indre Navickaite; Josephine Gruetzke; Lee-Julia Bartsch; Saria ...
Optimised long-read sequence bioinformatics tool for the analysis of the resistome and microbial communities
Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Manal AbuOun; Saria Otani; Indre Navickaite; Mathieu Gand; Bram Bloemen; Kevin Vanneste; Valeria Michelacci; ...
Report on initial findings of on-site diagnostic tests and IT solutions for human clinical, veterinary and environmental samples for early warning of emerging resistant pathogens
Mathieu Gand; Nancy Roosens; Kevin Vanneste; Sigrid C.J. De Keersmaecker; Quillan Dijkstra; Saria Otani; Michael Brouwer Source: OpenAIRE, Zenodo, p.12 (2022) Accession Number: ...
Assessment of the Feasibility of a Future Integrated Larger-Scale Epidemiological Study to Evaluate Health Risks of Air Pollution Episodes in Children.
Publication Type: Peer reviewed scientific article Authors: S. Nauwelaerts; Koen De Cremer; Natalia Bustos Sierra; Mathieu Gand; D. Van Geel; Delvoye, Maud; Els Vandermassen; Jordy Vercauteren; ...
Shotgun metagenomics as a ONE Health tool for better protecting human health
Publication Type: Scientific poster, presentation or proceeding Authors: Mathieu Gand; Florence E Buytaers; Bram Bloemen; Assia Saltykova; Sarah Denayer; Bavo Verhaegen; Wesley Mattheus; Denis ...
Metagenomics to Detect and Characterize Viruses in Food Samples at Genome Level? Lessons Learnt from a Norovirus Study
Publication Type: Peer reviewed scientific article Authors: Florence E Buytaers; Bavo Verhaegen; Mathieu Gand; Jolien D'aes; Kevin Vanneste; Nancy Roosens; Kathleen Marchal; Sarah Denayer; ...
Strategy to Develop and Evaluate a Multiplex RT-ddPCR in Response to SARS-CoV-2 Genomic Evolution.
Publication Type: Peer reviewed scientific article Authors: Laura Van Poelvoorde; Mathieu Gand; Marie-Alice Fraiture; Sigrid C.J. De Keersmaecker; Bavo Verhaegen; Koenraad Van Hoorde; Ann Brigitte ...