Zoekresultaten - 265 results
Application of a strain-level shotgun metagenomics approach on food samples: resolution of the source of a Salmonella food-borne outbreak
strain-level shotgun metagenomics approach for source tracking. We received two suspect food samples: the full meal and some freshly made tartar sauce served with this meal, requiring the use of raw eggs. After ...
Case Report: Multidrug Resistant Raoultella ornithinolytica in a Septicemic Calf
Publication Type: Peer reviewed scientific article Authors: Mathilde L Pas; Kevin Vanneste; Jade Bokma; Van Driessche, Laura; Sigrid C.J. De Keersmaecker; Nancy Roosens; Haesebrouck, Freddy; Boyen, ...
Development of a real-time PCR marker targeting a new unauthorized genetically modified microorganism producing protease identified by DNA walking
sequences between the pUB110 shuttle vector and a Bacillus amyloliquefaciens gene coding for a protease, the presence of the GMM was shown. Based on these sequences of interest, a real-time PCR marker was ...
Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing Technologies
Publication Type: Peer reviewed scientific article Authors: Florence E Buytaers; Assia Saltykova; Sarah Denayer; Bavo Verhaegen; Kevin Vanneste; Nancy Roosens; Piérard, Denis; Marchal, Kathleen; ...
Review on current scientific literature and overview of commercially available methods for on-site DNA isolation
Michelacci; Francesca Marotta; Marco Di Domenico; Giuliano Garofolo; Michael Brouwer Source: OpenAIRE, Zenodo, p.15 (2021) Accession Number: https://doi.org/10.5281/zenodo.4724557 URL: ...
Phylogenomic Investigation of Increasing Fluoroquinolone Resistance among Belgian Cases of Shigellosis between 2013 and 2018 Indicates Both Travel-Related Imports and Domestic Circulation.
Publication Type: Peer reviewed scientific article Authors: Bert Bogaerts; Raf Winand; Julien Van Braekel; Wesley Mattheus; Sigrid C.J. De Keersmaecker; Nancy Roosens; Marchal, Kathleen; Kevin ...
Concentrations and distribution of chlorinated paraffins in Belgian foods
occurrence of long-chain CP s (LCCP s). LCCP s were detected in 35% of the 20 subset samples while the HRMS results for SCCP s and MCCP s matched closely with those obtained by GC- MS. This study reveals the ...
A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products
Publication Type: Peer reviewed scientific article Authors: Florence E Buytaers; Marie-Alice Fraiture; Bas Berbers; Els Vandermassen; Stefan Hoffman; N. Papazova; Kevin Vanneste; Marchal, Kathleen; ...
Deepening of In Silico Evaluation of SARS-CoV-2 Detection RT-qPCR Assays in the Context of New Variants
Keersmaecker Source: Genes, Volume 12, Issue 4 (2021) Keywords: SARS-CoV-2; COVID-19; variants; detection; RT-qPCR; in silico specificity evaluation; bioinformatics tool; WGS data; mismatches; primers and probes ...
Retrospective survey of unauthorized genetically modified bacteria harbouring antimicrobial resistance genes in feed additive vitamin B2 commercialized in Belgium: Challenges and solutions
Publication Type: Peer reviewed scientific article Authors: Marie-Alice Fraiture; Laure Joly; Els Vandermassen; Delvoye, Maud; D. Van Geel; Jean-Yves Michelet; Els Van Hoeck; Nathalie De Jaeger; N. ...