Zoekresultaten - 16 results
Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B2 products sold on the Belgian market using whole-genome sequencing
Publication Type: Peer reviewed scientific article Authors: Bert Bogaerts; Marie-Alice Fraiture; Tom Van Nieuwenhuysen; Bram Jacobs; Koenraad Van Hoorde; Sigrid C.J. De Keersmaecker; Nancy Roosens; ...
Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes
Michelacci, Valeria; Matamoros, Bosco Rodríguez; González-Zorn, Bruno; Brouwer, Michael S. M.; Di Marcantonio, Lisa; Bloemen, Bram; Vanneste, Kevin; Roosens, Nancy H. C. J.; AbuOun, Manal; De Keersmaecker ...
Comparison of 6 DNA extraction methods for isolation of high yield of high molecular weight DNA suitable for shotgun metagenomics Nanopore sequencing to detect bacteriaAbstractBackgroundResultsConclusion
Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Bram Bloemen; Kevin Vanneste; Nancy Roosens; Sigrid C.J. De Keersmaecker Source: BMC Genomics, Volume 24, Issue 1 (2023) ...
Targeted High-Throughput Sequencing Enables the Detection of Single Nucleotide Variations in CRISPR/Cas9 Gene-Edited Organisms
Sigrid C.J. De Keersmaecker; Kevin Vanneste; Nancy Roosens Source: Foods, Volume 12, Issue 3 (2023) Keywords: CRISPR/Cas9 detection food and feed chain Genetically modified organism high-throughput ...
Listeria monocytogenes isolates from Cornu aspersum snails: Whole genome-based characterization and host-pathogen interactions in a snail infection model.
Publication Type: Peer reviewed scientific article Authors: Kotzamanidis, Charalampos; Malousi, Andigoni; Esmeralda Dushku; Alexandre Dobly; Sigrid C.J. De Keersmaecker; Nancy Roosens; Karathodorou, ...
Detection and identification of authorized and unauthorized GMOs using high-throughput sequencing with the support of a sequence-based GMO database
Publication Type: Peer reviewed scientific article Authors: Assia Saltykova; Julien Van Braekel; N. Papazova; Marie-Alice Fraiture; Deforce, Dieter; Kevin Vanneste; Sigrid C.J. De Keersmaecker ...
Application of a strain-level shotgun metagenomics approach on food samples: resolution of the source of a Salmonella food-borne outbreak
Pochet, Brigitte; Vera Cantaert; Marchal, Kathleen; Sarah Denayer; Sigrid C.J. De Keersmaecker Source: Microbial Genomics, Volume 7, Issue 4 (2021) Keywords: food surveillance Metagenomics outbreak ...
A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products
Nancy Roosens; Sigrid C.J. De Keersmaecker Source: Food Chemistry: Molecular Sciences, Volume 2 (2021) Keywords: AMR genetically modified microorganism identification long and short read sequencing ...
A genoserotyping system for a fast and objective identification of Salmonella serotypes commonly isolated from poultry and pork food sectors in Belgium.
Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Wesley Mattheus; Nancy Roosens; Katelijne Dierick; Marchal, Kathleen; Sophie Bertrand; Sigrid C.J. De Keersmaecker Source: ...
Strategy for the identification of micro-organisms producing food and feed products: Bacteria producing food enzymes as study case
Publication Type: Peer reviewed scientific article Authors: Marie Deckers; Kevin Vanneste; Raf Winand; Sigrid C.J. De Keersmaecker; Sarah Denayer; Marc Heyndrickx; Dieter Deforce; Marie-Alice ...