Zoekresultaten - 626 results

Listeria monocytogenes isolates from Cornu aspersum snails: Whole genome-based characterization and host-pathogen interactions in a snail infection model.

Argyro; Alexandra Staikou; Antonios Zdragas; Minas Yiangou Source: Fish Shellfish Immunol, Volume 123 (2022) Keywords: Animals Host-Pathogen Interactions Listeria monocytogenes Listeriosis Meat whole genome ...

Development of a data-intensive centralized system for surveillance and outbreak investigation of bacterial pathogens using whole-genome sequencing

Publication Type: Dissertation Authors: Bert Bogaerts Source: Ghent University, Gh, p.250 (2021) Keywords: bioinformatics public health VALIDATION whole-genome sequencing Abstract: Whole genome ...

Metagenomics to Detect and Characterize Viruses in Food Samples at Genome Level? Lessons Learnt from a Norovirus Study

Publication Type: Peer reviewed scientific article Authors: Florence E Buytaers; Bavo Verhaegen; Mathieu Gand; Jolien D'aes; Kevin Vanneste; Nancy Roosens; Kathleen Marchal; Sarah Denayer; Sigrid C.J. De Keersmaecker Source: Foods, Volume 11, Issue 2 ...

Strategy and Performance Evaluation of Low-Frequency Variant Calling for SARS-CoV-2 Using Targeted Deep Illumina Sequencing

curtail the virus spread. Additionally, emerging SARS-CoV-2 variants have increased the need for genomic surveillance to detect particular strains because of their potentially increased transmissibility, ...

Detection and identification of authorized and unauthorized GMOs using high-throughput sequencing with the support of a sequence-based GMO database

–veiligheid Santé et environnement Gezondheid en milieu Service:  Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics ...

Orbivirus Screening from Imported Captive Oryx in the United Arab Emirates Stresses the Importance of Pre-Import and Transit Measures

Emirates. BTV-2 genome was detected in 6/16 of the Arabian Oryx, and amongst those, one out of six was seronegative. None of the tested samples was found positive for EHDV. Our results illustrate the wide ...

A robust, cost-effective and widely applicable whole-genome sequencing protocol for capripoxviruses

Publication Type: Peer reviewed scientific article Authors: Elisabeth Mathijs; Andy Haegeman; Kris De Clercq; Steven Van Borm; Frank Vandenbussche Source: Journal of Virological Methods (2022) Health Topics:  Animal health Santé animale Diergezondheid Ful ...

Presence of chlorinated paraffins in foodstuffs and intake of the belgian population

génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Plateforme chromatographie et spectrométrie de masse Platform chromatografie en ...

WGS- versus ORF5-Based Typing of PRRSV: A Belgian Case Study.

database is available. In this study, we performed whole-genome sequencing (WGS) on a collection of 124 PRRSV-1 positive serum samples that were collected over a 5-year period (2015-2019) in Belgium. Our ...

Metagenomic sequencing determines complete infectious bronchitis virus (avian Gammacoronavirus) vaccine strain genomes and associated viromes in chicken clinical samples.

genome with 99.95% nucleotide identity to vaccine strain 793B. In addition, substantial read counts (16% of viral reads) allowed the assembly of a near-complete chicken astrovirus genome, while lower read ...

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