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Zoekresultaten - 18 results
A bioinformatics WGS workflow for clinical complex isolate analysis, validated using a reference collection extensively characterized with conventional methods and approaches.
Keersmaecker; Nancy Roosens; Marchal, Kathleen; Vanessa Mathys; Vanneste, Kevin Source: J Clin Microbiol (2021) Abstract: The use of whole genome sequencing (WGS) for routine typing of bacterial isolates has ...
A genoserotyping system for a fast and objective identification of Salmonella serotypes commonly isolated from poultry and pork food sectors in Belgium.
Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Wesley Mattheus; Nancy Roosens; Dierick, Katelijne; Marchal, Kathleen; Sophie Bertrand; Sigrid De Keersmaecker Source: Food ...
Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination.
Publication Type: Peer reviewed scientific article Authors: Berbers, Bas; Pieter-Jan Ceyssens *; Bogaerts, Pierre; Vanneste, Kevin; Nancy Roosens; Marchal, Kathleen; Sigrid De Keersmaecker Source: ...
Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study.
Publication Type: Peer reviewed scientific article Authors: Saltykova, Assia; Buytaers, Florence E; Denayer, Sarah; Verhaegen, Bavo; Piérard, Denis; Nancy Roosens; Marchal, Kathleen; Sigrid De ...
A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.
Publication Type: Peer reviewed scientific article Authors: Buytaers, Florence E; Saltykova, Assia; Denayer, Sarah; Verhaegen, Bavo; Vanneste, Kevin; Nancy Roosens *; Piérard, Denis; Marchal, ...
The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.
Publication Type: Peer reviewed scientific article Authors: Nouws, Stéphanie; Bogaerts, Bert; Verhaegen, Bavo; Denayer, Sarah; Crombé, Florence; De Rauw, Klara; Piérard, Denis; Marchal, Kathleen ...
A multiplex oligonucleotide ligation-PCR method for the genoserotyping of common Salmonella using a liquid bead suspension assay
Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Wesley Mattheus; Roosens, Nancy H.C.; Dierick, Katelijne; Marchal, Kathleen; De Keersmaecker, Sigrid C.J.; Sophie Bertrand ...
Development of a real-time PCR method for the genoserotyping of Salmonella Paratyphi B variant Java.
Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Wesley Mattheus; Saltykova, Assia; Roosens, Nancy; Katelijne Dierick; Marchal, Kathleen; Sigrid De Keersmaecker; Sophie ...
A multiplex oligonucleotide ligation-PCR method using the Luminex technology for the geno-serotyping of the most common Salmonella in Belgium
Publication Type: Scientific poster, presentation or proceeding Authors: Mathieu Gand; Wesley Mattheus; A Saltykova; Nancy Roosens; Katelijne Dierick; Marchal, Kathleen; Sigrid De Keersmaecker; ...
Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.
Publication Type: Peer reviewed scientific article Authors: Assia, Saltykova; Wuyts, Véronique; Wesley Mattheus; Sophie Bertrand; Nancy Roosens; Marchal, Kathleen; Sigrid De Keersmaecker Source: ...