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Zoekresultaten - 7 results

Application of a strain-level shotgun metagenomics approach on food samples: resolution of the source of a Salmonella food-borne outbreak

Pochet, Brigitte; Vera Cantaert; Marchal, Kathleen; Sarah Denayer; Sigrid C.J. De Keersmaecker Source: Microbial Genomics, Volume 7, Issue 4 (2021) Keywords: food surveillance Metagenomics outbreak ...

Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing Technologies

Publication Type: Peer reviewed scientific article Authors: Florence E Buytaers; Assia Saltykova; Sarah Denayer; Bavo Verhaegen; Kevin Vanneste; Nancy Roosens; Piérard, Denis; Marchal, Kathleen ...

Whole Genome Sequencing Provides an Added Value to the Investigation of Staphylococcal Food Poisoning Outbreaks

Publication Type: Peer reviewed scientific article Authors: Stéphanie Nouws; Bert Bogaerts; Bavo Verhaegen; Sarah Denayer; Lasse Laeremans; Kathleen Marchal; Nancy Roosens; Kevin Vanneste; Sigrid ...

A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.

Publication Type: Peer reviewed scientific article Authors: Florence E Buytaers; Assia Saltykova; Sarah Denayer; Bavo Verhaegen; Kevin Vanneste; Nancy Roosens; Piérard, Denis; Marchal, Kathleen ...

The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.

Publication Type: Peer reviewed scientific article Authors: Stéphanie Nouws; Bert Bogaerts; Bavo Verhaegen; Sarah Denayer; Florence Crombé; Klara De Rauw; Denis Piérard; Kathleen Marchal; Kevin ...

Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates.

Publication Type: Peer reviewed scientific article Authors: Stéphanie Nouws; Bert Bogaerts; Bavo Verhaegen; Sarah Denayer; Piérard, Denis; Marchal, Kathleen; Nancy Roosens; Kevin Vanneste; Sigrid ...

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