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Zoekresultaten - 53 results
A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.
Publication Type: Peer reviewed scientific article Authors: Florence E Buytaers; Assia Saltykova; Sarah Denayer; Bavo Verhaegen; Kevin Vanneste; Nancy Roosens; Piérard, Denis; Marchal, Kathleen; ...
The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.
Publication Type: Peer reviewed scientific article Authors: Stéphanie Nouws; Bert Bogaerts; Bavo Verhaegen; Sarah Denayer; Florence Crombé; Klara De Rauw; Denis Piérard; Kathleen Marchal; Kevin ...
Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates
Publication Type: Peer reviewed scientific article Authors: Stéphanie Nouws; Bert Bogaerts; Bavo Verhaegen; Sarah Denayer; Piérard, Denis; Marchal, Kathleen; Nancy Roosens; Kevin Vanneste; Sigrid ...
Combining short and long read sequencing to characterize antimicrobial resistance genes on plasmids applied to an unauthorized genetically modified Bacillus
Publication Type: Peer reviewed scientific article Authors: Bas Berbers; Assia Saltykova; Cristina Garcia-Graells; Philipp, Patrick; Fabrice Arella; Marchal, Kathleen; Raf Winand; Kevin Vanneste; ...
First detection of a plasmid located carbapenem resistant blaVIM-1 gene in E. coli isolated from meat products at retail in Belgium in 2015
Publication Type: Peer reviewed scientific article Authors: Cristina Garcia-Graells; Bas Berbers; Bavo Verhaegen; Kevin Vanneste; Marchal, Kathleen; Nancy Roosens; N Botteldoorn; Sigrid C.J. De ...
A multiplex oligonucleotide ligation-PCR method for the genoserotyping of common Salmonella using a liquid bead suspension assay
Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Wesley Mattheus; Nancy Roosens; Katelijne Dierick; Marchal, Kathleen; Sigrid C.J. De Keersmaecker; Sophie Bertrand Source: ...
Detailed Evaluation of Data Analysis Tools for Subtyping of Bacterial Isolates Based on Whole Genome Sequencing: as a Proof of Concept.
Publication Type: Peer reviewed scientific article Authors: Assia Saltykova; Wesley Mattheus; Sophie Bertrand; Nancy Roosens; Marchal, Kathleen; Sigrid C.J. De Keersmaecker Source: Front Microbiol, ...
Development of a real-time PCR method for the genoserotyping of Salmonella Paratyphi B variant Java.
Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Wesley Mattheus; Assia Saltykova; Nancy Roosens; Katelijne Dierick; Marchal, Kathleen; Sigrid C.J. De Keersmaecker; Sophie ...
A multiplex oligonucleotide ligation-PCR method using the Luminex technology for the geno-serotyping of the most common Salmonella in Belgium
Publication Type: Scientific poster, presentation or proceeding Authors: Mathieu Gand; Wesley Mattheus; Assia Saltykova; Nancy Roosens; Katelijne Dierick; Marchal, Kathleen; Sigrid C.J. De ...
Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.
Publication Type: Peer reviewed scientific article Authors: Assia Saltykova; Wuyts, Véronique; Wesley Mattheus; Sophie Bertrand; Nancy Roosens; Marchal, Kathleen; Sigrid C.J. De Keersmaecker Source: ...