Zoekresultaten - 39 results
Optimised long-read sequence bioinformatics tool for the analysis of the resistome and microbial communities
https://doi.org/10.5281/zenodo.7433258 Keywords: Antimicrobial resistance bioinformatics Long read metagenomic sequencing Microbial community Resistome Health Topics: Antimicrobial resistance (AMR) Food consumption and food safety ...
Report on initial findings of on-site diagnostic tests and IT solutions for human clinical, veterinary and environmental samples for early warning of emerging resistant pathogens
https://doi.org/10.5281/zenodo.7433281 URL: https://doi.org/10.5281/zenodo.7433281 Keywords: Long read metagenomics Metagenome On-site metagenomics Health Topics: Antimicrobial resistance (AMR) Food consumption and food safety Animal ...
Metagenomic Characterization of Multiple Genetically Modified Bacillus Contaminations in Commercial Microbial Fermentation Products
12, Issue 12 (2022) Keywords: Bacillus food enzyme genetically modified microorganisms (GMM) hybrid genome assembly metagenomic shotgun sequencing Abstract: Genetically modified microorganisms (GMM) are ...
Shotgun metagenomics for strain-level food-borne outbreak investigation
Publication Type: Scientific poster, presentation or proceeding Authors: Florence E Buytaers Source: FoodMicro (2022) Service: Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in appli ...
A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products
Publication Type: Scientific poster, presentation or proceeding Authors: Florence E Buytaers; Marie-Alice Fraiture; Bas Berbers; Els Vandermassen; Stefan Hoffman; N. Papazova; Kevin Vanneste; Kathleen Marchal; Nancy Roosens; Sigrid C.J. De Keersmaecker So ...
Shotgun metagenomics as a ONE Health tool for better protecting human health
identify all biological material in a sample without a priori knowing what to look for, could transform the way specific key public health questions can be addressed, in a ONE Health context. Metagenomics is ...
Development, evaluation and optimization of next generation sequencing data analysis tools in support of a fast response for public health and food chain safety
Publication Type: Dissertation Authors: Assia Saltykova Source: Ghent University, Ghent, Belgium, p.308 (2022) Keywords: bioinformatics tools Database GMO Metagenomics NGS outbreak investigation ...
Ready to resolve the next foodborne outbreaks fastly without isolation using metagenomics
Publication Type: Scientific poster, presentation or proceeding Authors: Florence E Buytaers Source: Be Ready symposium, Issue Sciensano (2022) Service: Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Trans ...
Metagenomics to Detect and Characterize Viruses in Food Samples at Genome Level? Lessons Learnt from a Norovirus Study
Publication Type: Peer reviewed scientific article Authors: Florence E Buytaers; Bavo Verhaegen; Mathieu Gand; Jolien D'aes; Kevin Vanneste; Nancy Roosens; Kathleen Marchal; Sarah Denayer; Sigrid C.J. De Keersmaecker Source: Foods, Volume 11, Issue 2 ...
Strategy and Performance Evaluation of Low-Frequency Variant Calling for SARS-CoV-2 Using Targeted Deep Illumina Sequencing
of interest into raw wild-type sequencing data, or by mixing wild-type and mutant raw sequencing data, to construct mixed samples subjected to WGS using a tiling amplicon-based targeted metagenomics ...