Zoekresultaten - 20 results

Shotgun metagenomics as a ONE Health tool for better protecting human health

a faster time frame. EFSA called for such proof-of-concepts in a recent opinion about the use of metagenomics for food safety.  Additionally, we showed that the use of long-read sequencing can help to ...

WGS- versus ORF5-Based Typing of PRRSV: A Belgian Case Study.

circulating PRRSV strains by means of sequencing is crucial for developing adequate control strategies. Most genetic studies only target the highly variable open reading frame (ORF) 5, for which an extensive ...

Use of Whole Genome Sequencing Data for a First in Silico Specificity Evaluation of the RT-qPCR Assays Used for SARS-CoV-2 Detection.

Keersmaecker Source: Int J Mol Sci, Volume 21, Issue 15 (2020) Keywords: Betacoronavirus Coronavirus Infections Databases, Genetic Genome, Viral Humans Open Reading Frames Pandemics Pneumonia, Viral ...

Towards a unified classification for human respiratory syncytial virus genotypes.

HRSV genomes (>12,000 bp) were downloaded from GenBank and divided into the two subgroups: HRSV-A and HRSV-B. From whole-genome alignments, the regions that correspond to the open reading frame of the ...

Complete coding sequence of a novel picorna-like virus in a blackbird infected with Usutu virus.

163, Issue 6 (2018) Keywords: Animals Belgium Bird Diseases Chromosome Mapping Coinfection Flavivirus Flavivirus Infections Genome, Viral Open Reading Frames Passeriformes Phylogeny Picornaviridae ...

Experimental evidence for proteins constituting virion components and particle morphogenesis of bacteriophage ZF40.

363, Issue 6 (2016) Keywords: Bacteriophages Capsid Proteins Gene Order Genome, Viral Open Reading Frames Proteome Viral Proteins Virion Abstract: Bacteriophage ZF40 is the only currently available, ...

Deletion of Murid Herpesvirus 4 ORF63 Affects the Trafficking of Incoming Capsids toward the Nucleus.

tegument protein encoded by Kaposi’s sarcoma-associated herpesvirus open reading frame 63 (ORF63). To gain insight about the roles of ORF63 in the life cycle of a gammaherpesvirus, we generated null ...

Whole genome protein microarrays for serum profiling of immunodominant antigens of Bacillus anthracis.

challenged groups. However, a number of other chromosomally-located and plasmid encoded open reading frame proteins were also recognized by infected or exposed groups in comparison to controls. Some of these ...

Proteomic characterization of bovine herpesvirus 4 extracellular virions.

preparations allowed us to define protein localization. In parallel, in order to identify some previously undefined open reading frames, we mapped peptides detected in whole virion lysates onto the six frames of ...

Selection and characterization of a candidate therapeutic bacteriophage that lyses the Escherichia coli O104:H4 strain from the 2011 outbreak in Germany.

Disease Outbreaks Escherichia coli Infections Germany Hemolytic-Uremic Syndrome Humans Open Reading Frames Shiga-Toxigenic Escherichia coli Abstract: In 2011, a novel strain of O104: H4 Escherichia coli ...

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