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Zoekresultaten - 4 results
Development of strain-level shotgun metagenomics approaches to detect and characterize microbiological contaminants in the context of food safety
microbiological foodborne contaminants to the strain level and with achievement of a relatedness study (phylogeny), with a focus on the applicability of the method in order to be easily implemented in reference ...
Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.
PLoS One, Volume 13, Issue 2 (2018) Keywords: bacterial phylogeny; food-borne; genes; NGS; WGS; computational biology/bioinformatics; disease outbreaks; outbreak; performance evaluation; pipeline; ...
Evolutionary History and Ongoing Transmission of Phylogenetic Sublineages of Mycobacterium tuberculosis Beijing Genotype in China.
low-resolution, high-rank (modern and ancient sublineages) markers. The molecular profiles and global and local phylogenies were compared to the strain phenotype and patient data. The phylogeographic patterns ...
Banana infecting fungus, Fusarium musae, is also an opportunistic human pathogen: are bananas potential carriers and source of fusariosis?
p.46-53 (2015) Keywords: Disease Reservoirs Fusariosis Fusarium Humans Molecular Sequence Data Musa Phylogeny Plant Diseases United States Abstract: During re-identification of Fusarium strains in the BCCM ...