Zoekresultaten - 25 results
Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes
Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Navickaite, Indre; Bartsch, Lee-Julia; Grützke, Josephine; Overballe-Petersen, Søren; Rasmussen, Astrid; Otani, Saria; Michelacci, Valeria; Matamoros, Bosco Rodríguez; González-Zorn ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Stefan; Nancy Roosens; De Keersmaecker, Sigrid C J; Vanneste, Kevin Source: J Clin Microbiol (2024) Keywords: Illumina nanopore sequencing outbreak public health whole-genome sequencing. Abstract: ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Stefan; Nancy Roosens; De Keersmaecker, Sigrid C J; Vanneste, Kevin Source: J Clin Microbiol (2024) Keywords: Illumina nanopore sequencing outbreak public health whole-genome sequencing. Abstract: ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Stefan; Nancy Roosens; De Keersmaecker, Sigrid C J; Vanneste, Kevin Source: J Clin Microbiol (2024) Keywords: Illumina nanopore sequencing outbreak public health whole-genome sequencing. Abstract: ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Hoffman; Nancy Roosens; Sigrid C.J. De Keersmaecker; Kevin Vanneste Source: J Clin Microbiol (2024) Abstract: Whole-genome sequencing has become the method of choice for bacterial outbreak investigation, ...
20231214_RAG_GENOMIC-SEQUENCING_RESPIRATORY-VIRUSES
Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Source: Sciensano, Brussels, p.10 (2023) Keywords: Genomics respiratory infections Abstract: 20231214_RAG_GENOME- SECUENCING_RESPIRATORY- VIRUSES Health Topics: Hea ...
Outbreak of Corynebacterium diphtheriae among asylum seekers in Belgium in 2022: operational challenges and lessons learnt.
Hoorelbeke, Bart; Piérard, Denis; Laura Cornelissen Source: Euro Surveill, Volume 28, Issue 44 (2023) Keywords: Belgium Corynebacterium diphtheriae Diphtheria Disease Outbreaks Humans Male Multilocus Sequence ...
Complete genome reconstruction of the global and European regional dispersal history of the lumpy skin disease virus.
this limitation has not yet been formally assessed. Furthermore, until present, whole genome sequencing in affected areas has remained patchy. This study combines the first fine-grained sampling of LSDV ...
Complete genome reconstruction of the global and European regional dispersal history of the lumpy skin disease virus.
this limitation has not yet been formally assessed. Furthermore, until present, whole genome sequencing in affected areas has remained patchy. This study combines the first fine-grained sampling of LSDV ...
A genomic appraisal of invasive Salmonella Typhimurium and associated antibiotic resistance in sub-Saharan Africa.
sequence data from 1303 S. Typhimurium isolates originating from 19 African countries and isolated between 1979 and 2017, here we show a thorough scaled appraisal of the population structure of iNTS disease ...