Zoekresultaten - 13 results
Transforming Shiga toxin-producing surveillance through whole genome sequencing in food safety practices.
Abstract: INTRODUCTION: Shiga toxin-producing (STEC) is a gastrointestinal pathogen causing foodborne outbreaks. Whole Genome Sequencing (WGS) in STEC surveillance holds promise in outbreak prevention and ...
Epidemiologische surveillance van shigatoxineproducerende Escherichia coli (STEC), 2019-2020
Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Stéphanie Jacquinet; Florence Crombé; Denis Piérard Source: p.5 (2021) Abstract: Sinds de oprichting van het ...
Surveillance épidémiologique de l’Escherichia coli producteur de Shiga-Toxine (STEC), 2019-2020.
Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Stéphanie Jacquinet; Florence Crombé; Denis Piérard Source: p.5 (0) Abstract: Depuis l’établissement du CNR ...
Validation strategy of a bioinformatics whole genome sequencing workflow for Shiga toxin-producing Escherichia coli using a reference collection extensively characterized with conventional methods
Kathleen Marchal; Nancy Roosens; Sigrid C.J. De Keersmaecker; Kevin Vanneste Source: Microbial Genomics, Volume 7, Issue 3 (2021) Abstract: Whole genome sequencing (WGS) enables complete characterization of ...
Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study.
Keersmaecker Source: Int J Mol Sci, Volume 21, Issue 16 (2020) Keywords: foodborne outbreak investigation public health strain-level metagenomics Abstract: Culture-independent diagnostics, such as metagenomic ...
A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.
Sigrid C.J. De Keersmaecker Source: Microorganisms, Volume 8, Issue 8 (2020) Keywords: food surveillance Metagenomics outbreak SNP analysis STEC whole genome Abstract: The management of a foodborne ...
The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.
whole genome sequencing Abstract: Gradually, conventional methods for foodborne pathogen typing are replaced by whole genome sequencing (WGS). Despite studies describing the overall benefits, National ...
Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates
Abstract: Whole genome sequencing (WGS) has proven to be the ultimate tool for bacterial isolate characterization and relatedness determination. However, standardized and harmonized workflows, e.g. for DNA ...
Surveillance épidémiologique des infections à STEC, données 2017-2018
Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Stéphanie Jacquinet; Piérard, Denis; Florence Crombé Source: p.6 (2019) Abstract: Depuis l’établissement du ...
Epidemiologische surveillance van VTEC infecties, data 2017-2018
Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Stéphanie Jacquinet; Florence Crombé; Denis Piérard Source: p.6 (2019) Abstract: Sinds de oprichting van het ...