Zoekresultaten - 10 results
Report on an initial assessment of long-read sequencing for metagenome (community and AMR) analysis (defined community, spiked and real simple and complex matrices) and comparison to current short-read standard
applied genomics Manuscript versions: DOI: https://doi.org/10.5281/zenodo.7429361 Full text language: English Category: Scientific reports, recommendations, guidance documents, directives and ...
The taxonomy of the Trichophyton rubrum complex: a phylogenomic approach
Publication Type: Peer reviewed scientific article Authors: Luc Cornet; Elizabet D'hooge; Nicolas Magain; Dirk Stubbe; Ann Packeu; Denis Baurain; Pierre Becker Source: Microbial Genomics ...
Use of a Whole Genome Sequencing-based approach for Mycobacterium tuberculosis surveillance in Europe in 2017-2019: an ECDC pilot study.
Dick van Soolingen; Marieke J van der Werf; Daniela Maria Cirillo; ECDC molecular surveillance project participants Source: Eur Respir J (2020) Abstract: Whole genome sequencing (WGS) can be used for ...
Development of a real-time PCR method for the genoserotyping of Salmonella Paratyphi B variant Java.
fermenting isolates (also called variant Java) of the same serotype trigger the less dangerous gastroenteritis. The determination of S. Paratyphi B variants requires a time-consuming process and complex ...
Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing
Publication Type: Peer reviewed scientific article Authors: The CRyPTIC Consortium and the 100000 Genomes Project; Allix-Béguec, Caroline; Irena Arandjelovic; Bi, Lijun; Patrick Beckert; Maryline ...
Application of whole genome data for in silico evaluation of primers and probes routinely employed for the detection of viral species by RT-qPCR using dengue virus as a case study.
real-time polymerase chain reaction (RT-qPCR) directed against genomic regions conserved between different isolates. Genetic variation can however result in mismatches of primers and probes with their ...
Environmental and genomic factors as well as interventions influencing smoking cessation: a systematic review of reviews and a proposed working model.
environmental factors, (2) genomic factors, (3) gene-environment interactions, and (4) evidence-based interventions. The model demonstrates the complex network of factors influencing SC. CONCLUSION: The working ...
A multifaceted study of Pseudomonas aeruginosa shutdown by virulent podovirus LUZ19
knowledge on genome content and diversity of bacterial viruses, insights in intracellular phage development and its impact on bacterial physiology are very limited. We present a multifaceted study combining ...
Detection of a geographical and endemic cluster of hyper-invasive meningococcal strains.
Evolution, Molecular Female Genome, Bacterial Geography Humans Infant Male Meningococcal Infections Microbial Sensitivity Tests middle aged Multilocus Sequence Typing Neisseria meningitidis, Serogroup ...
Effect of PstS sub-units or PknD deficiency on the survival of Mycobacterium tuberculosis.
Molecular Sequence Data Mycobacterium tuberculosis Protein Kinases Reverse Transcriptase Polymerase Chain Reaction Tuberculosis Abstract: The membrane-associated phosphate-specific transporter (Pst) complex ...