Zoekresultaten - 88 results
Genetic relatedness of Staphylococcus aureus isolates within food outbreaks by single nucleotide polymorphisms.
Food Poisoning Staphylococcal Infections Staphylococcus aureus whole genome sequencing Abstract: Investigation of bacterial food outbreaks by whole genome sequencing can rely on the inspection of the ...
Galaxy @Sciensano: a comprehensive bioinformatics portal for genomics-based microbial typing, characterization, and outbreak detection.
pathogens with active genomic surveillance programs, and clinical relevance, such as Escherichia coli, Listeria monocytogenes, Salmonella spp. and Mycobacterium tuberculosis. These tools and pipelines utilize ...
Can Wastewater Surveillance Enhance Genomic Tracking of Climate-Driven Pathogens?
applied genomics Manuscript versions: DOI: https://doi.org/10.3390/microorganisms13020294 File: Version: Published Full text access: Public Access Full text language: English Category: Peer-reviewed ...
Antimicrobial resistance in ESBL and indicator E. coli, Campylobacter spp.,Salmonella spp., methicillin-resistant Staphylococcus aureus (MRSA) and Enterococcus faecalis and faecium isolated from food and food-producing animals (primary production) in 2023
resistance levels are lower in C. jejuni than in C. coli. In 2023, Salmonella spp. recovered from food matrices have been analysed by whole genome sequencing (WGS). The highest levels of predicted ...
Wastewater-based epidemiological surveillance- Weekly report
https://www.sciensano.be/en/biblio/wastewater-based-epidemiological-surveillance-weekly-report Keywords: applied genomics environment epidemiology Surveillance wastewater wastewater surveillance wastewater-based epidemiology Service: Épidémiologie des maladies infectieuses Epidemiologie van ...
be.Prepared: Transition to timely genomic resistance surveillance
pathogens when needed for public health. A key step in improving infectious disease surveillance is connecting and combining different types of data—such as genomic, clinical, and epidemiological ...
Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes
transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Manuscript versions: DOI: https://sciensano.be/en/10.3389/fmicb.2024.1336532 ...
Exploring grants & actions for advancing laborabory and digital capacities for health emergency preparedness and response: be.Prepared
initiatives have intensified efforts to strengthen national infrastructures for whole genome sequencing (WGS) of pathogens in response to the urgent needs of the COVID-19 pandemic. This pivotal experience ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Stefan; Nancy Roosens; De Keersmaecker, Sigrid C J; Vanneste, Kevin Source: J Clin Microbiol (2024) Keywords: Illumina nanopore sequencing outbreak public health whole-genome sequencing. Abstract: ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Stefan; Nancy Roosens; De Keersmaecker, Sigrid C J; Vanneste, Kevin Source: J Clin Microbiol (2024) Keywords: Illumina nanopore sequencing outbreak public health whole-genome sequencing. Abstract: ...