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Severity of infection with the SARS-CoV-2 B.1.1.7 lineage among hospitalized COVID-19 patients in Belgium.
severity between hospitalized patients in Belgium infected with the SARS-CoV-2 variant B.1.1.7 and those infected with previously circulating strains. METHODS: The study is conducted within a causal ...
Whole-Genome Sequence Approach and Phylogenomic Stratification Improve the Association Analysis of Mutations With Patient Data in Influenza Surveillance.
exploring mutational effects in highly diverse Influenza A (H3N2) strains through considering the viral genetic background by using phylogenetic classification to stratify the samples. This resulted in ...
Shotgun metagenomics as a ONE Health tool for better protecting human health
laboratories, however without isolation and in a shorter time-frame. This could be achieved to the strain level even in samples with several E. coli strains. The method was also used to solve a Salmonella ...
Outbreaks of Foot-and-Mouth Disease in Burundi, East Africa, in 2016, Caused by Different Serotypes.
O and possibly serotype SAT1. The phylogenetic assessments showed the presence of topotypes A/Africa/G-I and SAT2 / IV, similarly to previously characterized virus strains from other countries in the ...
Listeria monocytogenes isolates from Cornu aspersum snails: Whole genome-based characterization and host-pathogen interactions in a snail infection model.
reactive oxygen species (ROS) generation in snails’ haemolymph. In contrast, the administration of the non-virulent strain which possesses a truncated mogR gene that regulates flagellar motility gene ...
High diversity of yeast species and strains responsible for vulvovaginal candidiasis in South-East Gabon
Publication Type: Peer reviewed scientific article Authors: M. Bignoumba; R. Onanga; B.S. Kumulungui; R.F. Kassa Kassa; Y. Mouanga Ndzime; K. Mbombe Moghoa; Dirk Stubbe; Pierre Becker Source: Journal of Medical Mycology (2022) Keywords: Africa Candida niv ...
Investigations upon the Improvement of Dermatophyte Identification Using an Online Mass Spectrometry Application.
by adding new reference spectra to the MSI-2 application. Nine libraries were set up, comprising an increasing number of spectra obtained from reference strains that were submitted to various culture ...
Strategy and Performance Evaluation of Low-Frequency Variant Calling for SARS-CoV-2 Using Targeted Deep Illumina Sequencing
curtail the virus spread. Additionally, emerging SARS-CoV-2 variants have increased the need for genomic surveillance to detect particular strains because of their potentially increased transmissibility, ...
Recombinant LSDV Strains in Asia: Vaccine Spillover or Natural Emergence?
Publication Type: Peer reviewed scientific article Authors: Frank Vandenbussche; Elisabeth Mathijs; Wannes Philips; Saduakassova, Meruyert; Ilse De Leeuw; Sultanov, Akhmetzhan; Andy Haegeman; Kris De Clercq Source: Viruses, Volume 14, Issue 7 (2022) Healt ...
Poor antibody response to BioNTech/Pfizer COVID-19 vaccination in SARS-CoV-2 naïve residents of nursing homes.
vaccination than naïve staff. These poor responses involved lower levels of IgG to all spike domains, lower avidity of RBD IgG, and lower levels of Ab neutralizing the vaccine strain. No naïve resident had ...