Zoekresultaten - 27 results

Introduction of WGS in food microbiology: advantages and challenges

Belgium (2022) Keywords: antimicrobial resistance (AMR) Food Safety foodborne outbreak investigation Monitoring SciCom Whole genome sequencing (WGS) Abstract: In October 2021 the Scientific Committee of the ...

Population Analysis of O26 Shiga Toxin-Producing Causing Hemolytic Uremic Syndrome in Italy, 1989-2020, Through Whole Genome Sequencing.

Syndrome Humans ITALY Multilocus Sequence Typing Shiga-Toxigenic Escherichia coli whole genome sequencing Abstract: Shiga toxin-producing (STEC) belonging to the O26 serogroup represent an important cause of ...

Listeria monocytogenes isolates from Cornu aspersum snails: Whole genome-based characterization and host-pathogen interactions in a snail infection model.

whole genome sequencing Abstract: Even though Listeria monocytogenes is an extensive-studied foodborne pathogen, genome analysis of isolates from snails that may represent a reservoir of L. monocytogenes ...

Metagenomic sequencing determines complete infectious bronchitis virus (avian Gammacoronavirus) vaccine strain genomes and associated viromes in chicken clinical samples.

genome with 99.95% nucleotide identity to vaccine strain 793B. In addition, substantial read counts (16% of viral reads) allowed the assembly of a near-complete chicken astrovirus genome, while lower read ...

Metagenomic sequencing determines complete infectious bronchitis virus (avian Gammacoronavirus) vaccine strain genomes and associated viromes in chicken clinical samples.

methods allow the determination of complete coronavirus genomes from clinical chicken samples while providing additional insights in RNA virus sequence diversity and coinfecting viruses potentially ...

Epidemiology of the Staphylococcus aureus CA-MRSA USA300 in Belgium

Source: Eur J Clin Microbiol Infect Dis, Volume 40, Issue 11 (2021) Keywords: ADOLESCENT Adult Aged Aged, 80 and over Anti-Bacterial Agents Belgium Child Child, Preschool Female Genome, Bacterial Genotype ...

Whole-genome sequencing for TB source investigations: principles of ethical precision public health.

F González-Candelas; A Forier; E Juengst Source: Int J Tuberc Lung Dis, Volume 25, Issue 3 (2021) Abstract: Whole-genome sequencing (WGS) of allows rapid, accurate inferences about the sources, location and timing of ...

Phylogeography of Human and Animal Strains: Genetic Fingerprinting of Q Fever in Belgium.

samples. genotyping (WGS) further identified the spacer types and the genomic groups of Belgian strains: cattle and goat SNP2 / MLVA A isolates belonged to ST61 and genomic group III, while the goat SNP1 ...

The African swine fever virus isolate Belgium 2018/1 shows high virulence in European wild boar.

to France, Luxembourg and Germany. While detailed sequence analyses were recently performed, biological characterization was still pending. Here, we report on the experimental inoculation of four ...

Exploiting the Advantages of Molecular Tools for the Monitoring of Fungal Indoor Air Contamination: First Detection of in Indoor Air of Air-Conditioned Offices.

of in indoor air collected from offices in contact with contaminated air-conditioning reservoirs. While its presence in indoor air could not be demonstrated with culture-based methods, it was found by ...

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