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Zoekresultaten - 138 results
The GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics
need to implement new standards in species delineation, including whole-genome sequencing and phylogenomics. In this context, the genomic needs of the Belgian Coordinated Collections of Microorganisms ...
Sheeppox virus genome sequences from the European outbreaks in Spain, Bulgaria, and Greece in 2022-2024.
Keywords: Animals Bulgaria capripoxvirus Disease Outbreaks Genome, Viral Greece Phylogeny Poxviridae Infections Sheep Sheep Diseases Spain whole genome sequencing Abstract: In 2022-2024, three outbreaks of ...
FT-IR spectroscopy as a rapid method for Salmonella spp. typing
sensitivity of the method. Materials and Methods 115 Salmonella isolates fully characterized by whole genome sequencing were included in the study. The strains, originating from food, feed and primary ...
Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B2 products sold on the Belgian market using whole-genome sequencing
Kevin Vanneste Source: Frontiers in Microbiology, Volume 14 (2023) Keywords: Bacillus cereus Food Additives riboflavin Surveillance whole-genome sequencing Abstract: Bacillus cereus is a spore-forming ...
Targeted Whole Genome Sequencing of the Capripoxvirus Genome from Clinical Tissue Samples and Lyophilized Vaccine Batches.
achieved by whole-genome sequencing. In this chapter, we describe a robust, cost-effective, and widely applicable protocol for reconstructing (nearly) complete CaPV genomes directly from clinical samples or ...
Antimicrobial resistance in ESBL and indicator E. coli, Campylobacter spp.,Salmonella spp., methicillin-resistant Staphylococcus aureus (MRSA) and Enterococcus faecalis and faecium isolated from food and food-producing animals (primary production) in 2023
resistance levels are lower in C. jejuni than in C. coli. In 2023, Salmonella spp. recovered from food matrices have been analysed by whole genome sequencing (WGS). The highest levels of predicted ...
Genomic comparison between and and analysis of peptide-based biomarkers for serodiagnosis.
Fretin, David; Marché, Silvie Source: Front Vet Sci, Volume 11 (2024) Keywords: Antigens B-cell epitopes Diagnosis Mycobacterium bovis Mycobacterium microti Tuberculosis whole-genome sequencing Abstract: In ...
be.Prepared to increase Belgian integration of health data as a way of strengthening preparedness for infectious diseases
Genomics Infectious diseases national reference centre for human microbiology Pandemic preparedness public health Surveillance Whole genome sequencing (WGS) Abstract: The Belgian Preparedness Architecture ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Stefan; Nancy Roosens; De Keersmaecker, Sigrid C J; Vanneste, Kevin Source: J Clin Microbiol (2024) Keywords: Illumina nanopore sequencing outbreak public health whole-genome sequencing. Abstract: ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Stefan; Nancy Roosens; De Keersmaecker, Sigrid C J; Vanneste, Kevin Source: J Clin Microbiol (2024) Keywords: Illumina nanopore sequencing outbreak public health whole-genome sequencing. Abstract: ...