Zoekresultaten - 128 results

BSFM 2023- L. monocytogenes in Plant-Based Foods: insights from of a recent foodborne outbreak linked to vegan alternative to cheese

following ISO 11290 – 1 and – 2. A human strain was collected at the NRC Listeria. All isolated strains underwent serotyping for further characterisation at the NRC Listeria, and Whole Genome Sequencing (WGS) ...

Strain-level characterization without culture enrichment? Easing and accelerating outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling

adaptive sampling, following whole genome amplification to increase the amount of genetic material to meet sequencing standards. The strain-level data analysis was performed as previously described (Buytaers ...

Whole-Genome Sequencing-Based Screening of MRSA in Patients and Healthcare Workers in Public Hospitals in Benin.

Staphylococcus aureus whole-genome sequencing. Abstract: Methicillin-resistant (MRSA) constitutes a serious public health concern, with a considerable impact on patients’ health, and substantial healthcare costs. ...

Whole-Genome Sequence Approach and Phylogenomic Stratification Improve the Association Analysis of Mutations With Patient Data in Influenza Surveillance

applied genomics Manuscript versions:  File:  Version:  Published Full text access:  Public Access Full text language:  English Category:  A1 FOS Classification:  3.04 Medical biotechnology ...

Whole-genome sequencing-based phylogenomic investigation of unexpected Bacillus cereus contaminations collected from commercial vitamin B2 food and feed additives sold on the Belgian market

Keersmaecker; Nancy Roosens; Kevin Vanneste Source: Applied Bioinformatics and Public Health Microbiology, Wellcome Genome Campus, Hinxton, OK (2023) Service:  Activités transversales en génomique appliquée ...

Transforming Shiga toxin-producing surveillance through whole genome sequencing in food safety practices.

Nancy Roosens *; Sigrid C.J. De Keersmaecker * Source: Front Microbiol, Volume 14 (2023) Keywords: Food Safety implementation Shiga toxin-producing Escherichia coli Surveillance whole genome sequencing ...

Lumpy Skin Disease Virus Genome Sequence Analysis: Putative Spatio-Temporal Epidemiology, Single Gene versus Whole Genome Phylogeny and Genomic Evolution.

a whole-genome-sequence (WGS)-based phylogeny and compared it with single-gene-based phylogenies. To study population and spatiotemporal patterns in greater detail, we reconstructed networks. We determined that there are ...

Characterization of a Bacteriophage GEC_vB_Bfr_UZM3 Active against.

represent a strictly lytic phage belonging to a siphovirus morphotype. It is characterized by high stability at body temperature and in pH environments for about 6 h. Whole genome sequencing analysis of the ...

Homologous versus heterologous prime-boost COVID-19 vaccination: impact on clinical severity of Omicron among hospitalized COVID-19 patients in Belgium

confirmed by whole genome sequencing and vaccinated with a homologous (mRNA for prime/mRNA for boost) or heterologous (viral vector for prime/mRNA for boost) prime-boost vaccination schedule were included in ...

Targeted Chromosomal Barcoding Establishes Direct Genotype-Phenotype Associations for Antibiotic Resistance in Mycobacterium abscessus.

anticipate a future when a plethora of antibiotic-resistant strains will be isolated and sequenced. However, in the era of whole-genome sequencing, one of the challenges is to unequivocally assign a biological ...

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