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Oxford Nanopore Technologies R10 sequencing enables accurate cgMLST-based bacterial outbreak investigation of Neisseria meningitidis and Salmonella enterica when accounting for methylation-related errors
Publication Type: Peer reviewed scientific article Authors: Bogaerts, Bert; Margo Maex; Florian Commans; Goeders, Nathalie; An Van den Bossche; De Keersmaecker, Sigrid C. J.; Roosens, Nancy H. C.; ...
Metagenomics-based tracing of genetically modified microorganism contaminations in commercial fermentation products
Publication Type: Peer reviewed scientific article Authors: D'aes Jolien; Marie-Alice Fraiture *; Bert Bogaerts *; Yari Van Laere; Sigrid C.J. De Keersmaecker *; Nancy Roosens *; Kevin Vanneste ...
be.Prepared: Setting up a cloud-based bioinformatics platform and coupled NRC usability platform for integrated genomic-epidemiological analysis at a national level
Bossche; Pieter-Jan Ceyssens; Wesley Mattheus; Vanessa Mathys; Sarah Denayer; Sigrid C.J. De Keersmaecker; Bert Bogaerts; Florian Commans; Nancy Roosens; Heleen Masset; Raf Winand; Kevin Vanneste Source: ...
Molecular and WGS-based characterization of invasive Neisseria meningitidis isolates collected in Belgium (2016-2022) and MenB-FHbp vaccine coverage estimation of serogroup B.
Publication Type: Peer reviewed scientific article Authors: Nathalie Goeders; Kevin Vanneste; Nancy Roosens; Bert Bogaerts; Wesley Mattheus Source: Vaccine, Volume 55 (2025) Keywords: Immunisation ...
Galaxy @Sciensano: a comprehensive bioinformatics portal for genomics-based microbial typing, characterization, and outbreak detection.
Publication Type: Peer reviewed scientific article Authors: Bert Bogaerts; Julien Van Braekel; Alexander Van Uffelen; Jolien D'aes; Maxime Godfroid; Thomas Delcourt; Michael Kelchtermans; Kato ...
Whole-genome sequencing of soil- and foodborne Bacillus cereus sensu lato indicates no clear association between their virulence repertoire, genomic diversity and food matrix
Publication Type: Peer reviewed scientific article Authors: Bram Jacobs; Bogaerts, Bert; Verhaegen, Marie; Vanneste, Kevin; De Keersmaecker, Sigrid C.J.; Roosens, Nancy H.C.; Rajkovic, Andreja; ...
Immunovirological and environmental screening reveals actionable risk factors for fatal COVID-19 during post-vaccination nursing home outbreaksAbstract
Matthias; Wawina-Bokalanga, Tony; Marti-Carreras, Joan; Vanmechelen, Bert; Van Holm, Bram; Bloemen, Mandy; Dogne, Jean-Michel; Durkin, Keith; Ruelle, Jean; Wollants, Elke; Vermeersch, Pieter; COVID-19 ...
Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B2 products sold on the Belgian market using whole-genome sequencing
Publication Type: Peer reviewed scientific article Authors: Bert Bogaerts; Marie-Alice Fraiture; Tom Van Nieuwenhuysen; Bram Jacobs; Koenraad Van Hoorde; Sigrid C.J. De Keersmaecker; Nancy Roosens; ...
Genomic comparison between and and analysis of peptide-based biomarkers for serodiagnosis.
Publication Type: Peer reviewed scientific article Authors: Moens, Charlotte; Bogaerts, Bert; Lorente-Leal, Victor; Vanneste, Kevin; Sigrid C.J. De Keersmaecker *; Nancy Roosens; Mostin, Laurent; ...
Phage-Mediated Digestive Decolonization in a Gut-On-A-Chip Model: A Tale of Gut-Specific Bacterial Prosperity.
Publication Type: Peer reviewed scientific article Authors: Van Nieuwenhuyse, Brieuc; Merabishvili, Maya; Goeders, Nathalie; Vanneste, Kevin; Bogaerts, Bert; de Jode, Mathieu; Ravau, Joachim; ...