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Do genomic passports leave us more vulnerable or less vulnerable? Perspectives from an online citizen engagement
genomic passport Abstract: Since genomics is becoming commonplace in healthcare for the diagnosis, treatment, and prevention, the prospect of generating a genomic passport for all citizens is gaining ...
A genomic appraisal of invasive Salmonella Typhimurium and associated antibiotic resistance in sub-Saharan AfricaAbstract
Publication Type: Peer reviewed scientific article Authors: Van Puyvelde, Sandra; de Block, Tessa; Sridhar, Sushmita; Bawn, Matt; Kingsley, Robert A.; Ingelbeen, Brecht; Beale, Mathew A.; Barbé, Barbara; Jeon, Hyon Jin; Mbuyi-Kalonji, Lisette; Phoba, Mari ...
Development of Digital Droplet PCR Targeting the Influenza H3N2 Oseltamivir-Resistant E119V Mutation and Its Performance through the Use of Reverse Genetics Mutants
Viral diseases Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Manuscript versions: DOI: ...
Report on an initial assessment of long-read sequencing for metagenome (community and AMR) analysis (defined community, spiked and real simple and complex matrices) and comparison to current short-read standard
applied genomics Manuscript versions: DOI: https://doi.org/10.5281/zenodo.7429361 Full text language: English Category: Scientific reports, recommendations, guidance documents, directives and ...
First Belgian Report of Ertapenem Resistance in an ST11 Klebsiella Pneumoniae Strain Isolated from a Dog Carrying blaSCO-1 and blaDHA-1 Combined with Permeability Defects
(MLST) and the identification and localization of antimicrobial resistance (AMR) and virulence-associated genes. Three plasmids were reconstructed from the whole-genome sequence (WGS) data: the conjugative ...
Genomic epidemiology of persistently circulating MDR Shigella sonnei strains associated with men who have sex with men (MSM) in Belgium (2013–19)
Publication Type: Peer reviewed scientific article Authors: Nathalie Fischer; Margo Maex; Wesley Mattheus; An Van den Bossche; Dieter Van Cauteren; Valeska Laisnez; Hammami, Naïma; Pieter-Jan Ceyssens Source: Journal of Antimicrobial Chemotherapy, Volume ...
Whole-Genome Sequence Approach and Phylogenomic Stratification Improve the Association Analysis of Mutations With Patient Data in Influenza Surveillance.
mainly focused on the hemagglutinin gene. Whole-genome sequencing (WGS) enables tracking mutations across all influenza segments allowing a better understanding of the epidemiological effects of intra- and ...
Was SARI surveillance successful at monitoring SARS-CoV-2 circulation and its genomic evolution in Belgium throughout the pandemic?
Publication Type: Scientific poster, presentation or proceeding Authors: Sarah Denayer; Bert Monsieurs; Reinout Van Eycken; Marijke Reynders; Evelyn Petit; Koen Magerman; Door Jouck; Marieke Bleyen; Nicolas Dauby; Marc Hainaut; Lucie Seyler; Thomas Demuys ...
Development, evaluation and optimization of next generation sequencing data analysis tools in support of a fast response for public health and food chain safety
sécurité alimentaires Voedselconsumptie en –veiligheid Service: Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics ...
Listeria monocytogenes isolates from Cornu aspersum snails: Whole genome-based characterization and host-pathogen interactions in a snail infection model.
Argyro; Alexandra Staikou; Antonios Zdragas; Minas Yiangou Source: Fish Shellfish Immunol, Volume 123 (2022) Keywords: Animals Host-Pathogen Interactions Listeria monocytogenes Listeriosis Meat whole genome ...